RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ZNF224Q9NZL3 707 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 COPZ2Q9P299 210 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 CLEC4AQ9UMR7 237 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 RTTNQ86VV8 2226 aa11.45□□□□□ -0.58
SLIRP-201ENST00000238688 MED13LQ71F56 2210 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 A0A0G2JMP0 313 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 A0A0X1KG70 313 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 LDLRAD4O15165 306 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 TOXO94900 526 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 IL2RAP01589 272 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 STOMP27105 288 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 APLNRP35414 380 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 ZNF93P35789 620 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-201ENST00000238688 MAGEB1P43366 347 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 KIR2DL2P43627 348 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-201ENST00000238688 UBE2NP61088 152 aaKnown RBP11.44□□□□□ -0.58
SLIRP-201ENST00000238688 RAB1AP62820 205 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 BAK1Q16611 211 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 C3orf36Q3SXR2 165 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 TBRG1Q3YBR2 411 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 TMEM69Q5SWH9 247 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 C1orf185Q5T7R7 199 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 TMEM42Q69YG0 159 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 DNM1P46Q6ZS02 220 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 JAGN1Q8N5M9 183 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 OR4M2Q8NGB6 313 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 OR5M9Q8NGP3 310 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 LILRB4Q8NHJ6 448 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 KCNG3Q8TAE7 436 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 PIGTQ969N2 578 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 REEP6Q96HR9 211 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 FAM71F1Q96KD3 344 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-201ENST00000238688 SPOCK3Q9BQ16 436 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 SCPEP1Q9HB40 452 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 PCDHB16Q9NRJ7 776 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 ZNF319Q9P2F9 582 aa11.44□□□□□ -0.58
SLIRP-201ENST00000238688 ANKRD17O75179 2603 aaKnown RBP11.44□□□□□ -0.58
SLIRP-201ENST00000238688 ZNF816-ZNF321PA0A0X1KG74 233 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 hCG_38984A0A1B0GV85 526 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 NAP1L6A6NFF2 107 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 GGT3PA6NGU5 568 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 CHRM2P08172 466 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 SLC2A1P11166 492 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 AZGP1P25311 298 aaKnown RBP11.43□□□□□ -0.58
SLIRP-201ENST00000238688 SPOCK1Q08629 439 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 PMPCAQ10713 525 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 GPR176Q14439 515 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 P2RY14Q15391 338 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 C2orf76Q3KRA6 126 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 CLVS2Q5SYC1 327 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 TMEM211Q6ICI0 200 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 OR5AS1Q8N127 324 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 C9orf106Q8NAJ2 232 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 AKR7LQ8NHP1 331 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 CA5BP1Q8WTZ4 195 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 HTRA1Q92743 480 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 TRIM63Q969Q1 353 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 SGK3Q96BR1 496 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 POM121L2Q96KW2 1035 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 LURAP1Q96LR2 239 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 THAP7Q9BT49 309 aaPredicted RBP11.43□□□□□ -0.58
SLIRP-201ENST00000238688 CST11Q9H112 138 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 PIGMQ9H3S5 423 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 C12orf49Q9H741 205 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 RBFOX1Q9NWB1 397 aaKnown RBP11.43□□□□□ -0.58
SLIRP-201ENST00000238688 C14orf119Q9NWQ9 140 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 TBC1D24Q9ULP9 559 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 PROCRQ9UNN8 238 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 PIGLQ9Y2B2 252 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 AMDHD2Q9Y303 409 aa11.43□□□□□ -0.58
SLIRP-201ENST00000238688 RBMX2Q9Y388 322 aaKnown RBP11.43□□□□□ -0.58
SLIRP-201ENST00000238688 NOP16Q9Y3C1 178 aaKnown RBP11.43□□□□□ -0.58
SLIRP-201ENST00000238688 NKX2-6A6NCS4 301 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 ZNF780AO75290 641 aaPredicted RBP11.42□□□□□ -0.58
SLIRP-201ENST00000238688 CTAG2O75638 210 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 IGHV3-9P01782 118 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 HCKP08631 526 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 DBHP09172 617 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 GLI4P10075 376 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 CD79AP11912 226 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 CEACAM8P31997 349 aaPredicted RBP11.42□□□□□ -0.58
SLIRP-201ENST00000238688 TBC1D28Q2M2D7 210 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 LHFPL2Q6ZUX7 228 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 SEM1Q6ZVN7 128 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 LIX1LQ8IVB5 337 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 GABRG1Q8N1C3 465 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 CPEB3Q8NE35 698 aaKnown RBP11.42□□□□□ -0.58
SLIRP-201ENST00000238688 DUSP18Q8NEJ0 188 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 OR51D1Q8NGF3 324 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 OR51A2Q8NGJ7 313 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 OR13C9Q8NGT0 318 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 FCAMRQ8WWV6 532 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 RND1Q92730 232 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 ORAI1Q96D31 301 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 LYZL4Q96KX0 146 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 REPIN1Q9BWE0 567 aaKnown RBP11.42□□□□□ -0.58
SLIRP-201ENST00000238688 COQ3Q9NZJ6 369 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 KCNN3Q9UGI6 736 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 PRSS50Q9UI38 385 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 RHBDD3Q9Y3P4 386 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms