RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PRSS12P56730 875 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 MRPL49Q13405 166 aaKnown RBP15.69■□□□□ 0.1
VIM-201ENST00000224237 UNC119Q13432 240 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 GFRALQ6UXV0 394 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 KRT74Q7RTS7 529 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 MRPL21Q7Z2W9 205 aaKnown RBP15.69■□□□□ 0.1
VIM-201ENST00000224237 RNF144BQ7Z419 303 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 CXorf67Q86X51 503 aaPredicted RBP15.69■□□□□ 0.1
VIM-201ENST00000224237 PAQR4Q8N4S7 273 aaPredicted RBP15.69■□□□□ 0.1
VIM-201ENST00000224237 GCDHQ92947 438 aaPredicted RBP15.69■□□□□ 0.1
VIM-201ENST00000224237 PIGTQ969N2 578 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 ZC3HAV1LQ96H79 300 aaKnown RBP15.69■□□□□ 0.1
VIM-201ENST00000224237 ASF1BQ9NVP2 202 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 MYEF2Q9P2K5 600 aaKnown RBP15.69■□□□□ 0.1
VIM-201ENST00000224237 A0A1W2PR80 420 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 SCGNO76038 276 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 GDNFP39905 211 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 WNT5AP41221 380 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 ALDH3B1P43353 468 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 TSC22D1Q15714 1073 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 DMRTC1Q5HYR2 192 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 RAB12Q6IQ22 244 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 OR5L1Q8NGL2 311 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 OR52I2Q8NH67 350 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 UBASH3BQ8TF42 649 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 OBP2BQ9NPH6 170 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 ZGRF1Q86YA3 2104 aa15.68■□□□□ 0.1
VIM-201ENST00000224237 TRAV18A0A075B6X5 111 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 NGFP01138 241 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 PTGFRP43088 359 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 SRP9P49458 86 aaKnown RBP15.67■□□□□ 0.1
VIM-201ENST00000224237 EIF2B2P49770 351 aaKnown RBP15.67■□□□□ 0.1
VIM-201ENST00000224237 IDH3GP51553 393 aaPredicted RBP15.67■□□□□ 0.1
VIM-201ENST00000224237 CD300CQ08708 224 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 CRIP3Q6Q6R5 217 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 LHFPL2Q6ZUX7 228 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 AKAP14Q86UN6 197 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 FTMTQ8N4E7 242 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 CELF2-AS1Q8N7Q2 184 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 KCNG3Q8TAE7 436 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 FAM46BQ96A09 425 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 C1orf147Q96MC9 270 aaPredicted RBP15.67■□□□□ 0.1
VIM-201ENST00000224237 NEDD4LQ96PU5 975 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 PTTG3PQ9NZH4 202 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 STARD10Q9Y365 291 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 RBMX2Q9Y388 322 aaKnown RBP15.67■□□□□ 0.1
VIM-201ENST00000224237 CACNG2Q9Y698 323 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 CENPXA8MT69 81 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 ORC5O43913 435 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 ICMTO60725 284 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 ECDO95905 644 aaPredicted RBP15.67■□□□□ 0.1
VIM-201ENST00000224237 IGKV3-15P01624 115 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 GLI4P10075 376 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 NAT2P11245 290 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 CBR1P16152 277 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 FAM189A2Q15884 450 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 AGAP6Q5VW22 663 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 MTFR2Q6P444 385 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 DNM1P46Q6ZS02 220 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 DOLPP1Q86YN1 238 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 OR56B2PQ8NGI1 322 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 BORCS8Q96FH0 119 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 GAL3ST1Q99999 423 aa15.67■□□□□ 0.1
VIM-201ENST00000224237 C7orf50Q9BRJ6 194 aaKnown RBP15.67■□□□□ 0.1
VIM-201ENST00000224237 ITPR1Q14643 2758 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 FAM240BA0A1B0GVZ2 78 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 CELA3BP08861 270 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 PTHLHP12272 177 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 RBP2P50120 134 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 MTCP1P56278 107 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 AP3S2P59780 193 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 DYRK1AQ13627 763 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 BHLHA15Q7RTS1 189 aaPredicted RBP15.66■□□□□ 0.1
VIM-201ENST00000224237 WDR31Q8NA23 367 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 ZBTB8BQ8NAP8 495 aaPredicted RBP15.66■□□□□ 0.1
VIM-201ENST00000224237 CSNK2A3Q8NEV1 391 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 OR5D18Q8NGL1 313 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 TNFAIP8L1Q8WVP5 186 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 PIGCQ92535 297 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 S100A13Q99584 98 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 NUDT16L1Q9BRJ7 211 aaKnown RBP15.66■□□□□ 0.1
VIM-201ENST00000224237 CST11Q9H112 138 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 CDH20Q9HBT6 801 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 EIF3KQ9UBQ5 218 aaKnown RBP15.66■□□□□ 0.1
VIM-201ENST00000224237 SLC7A11Q9UPY5 501 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 ZNF835Q9Y2P0 537 aa15.66■□□□□ 0.1
VIM-201ENST00000224237 KIR2DL3P43628 341 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 FUT6P51993 359 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 KLF9Q13886 244 aaPredicted RBP15.65■□□□□ 0.1
VIM-201ENST00000224237 GPR176Q14439 515 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 HLXQ14774 488 aaPredicted RBP15.65■□□□□ 0.1
VIM-201ENST00000224237 PLCXD3Q63HM9 321 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 RFPL4BQ6ZWI9 263 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 MYPOPQ86VE0 399 aaPredicted RBP15.65■□□□□ 0.1
VIM-201ENST00000224237 DUSP18Q8NEJ0 188 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 TMEM59Q9BXS4 323 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 KLK11Q9UBX7 282 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 FAM230AA0A1W2PPH8 454 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 MEIOCA2RUB1 952 aa15.65■□□□□ 0.1
VIM-201ENST00000224237 RAB27BO00194 218 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms