RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 HIST2H3PS2Q5TEC6 136 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 FAM180AQ6UWF9 173 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 ASB18Q6ZVZ8 466 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 PTOV1Q86YD1 416 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 LINC00346Q8IVM7 164 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 WNT2BQ93097 391 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 PRRC1Q96M27 445 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 ACTRT3Q9BYD9 372 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 DEFB126Q9BYW3 111 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 METTL17Q9H7H0 456 aaPredicted RBP10.73□□□□□ -0.69
SRRT-216ENST00000618262 PKD1L2Q7Z442 2459 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 HOXB9P17482 250 aaPredicted RBP10.73□□□□□ -0.69
SRRT-216ENST00000618262 CXADRP78310 365 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 FUT5Q11128 374 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 FHL5Q5TD97 284 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 ZNF57Q68EA5 555 aaPredicted RBP10.73□□□□□ -0.69
SRRT-216ENST00000618262 ZNF615Q8N8J6 731 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 PLPP5Q8NEB5 264 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 OR56B1Q8NGI3 324 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 CTHRC1Q96CG8 243 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 NEURL3Q96EH8 262 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 POM121L2Q96KW2 1035 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 WFDC6Q9BQY6 131 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 FNDC11Q9BVV2 318 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 RAB1BQ9H0U4 201 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 BARX1Q9HBU1 254 aaPredicted RBP10.73□□□□□ -0.69
SRRT-216ENST00000618262 EXOSC3Q9NQT5 275 aaKnown RBP10.73□□□□□ -0.69
SRRT-216ENST00000618262 CACNA1BQ00975 2339 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 F6UZH7 168 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 H3BN98 237 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 ZIC2O95409 532 aaPredicted RBP10.72□□□□□ -0.69
SRRT-216ENST00000618262 CHRM4P08173 479 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 CT45A8P0DMV1 189 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 CT45A9P0DMV2 189 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 RAB5AP20339 215 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 FBXW4P57775 412 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 TMEM177Q53S58 311 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 CT45A2Q5DJT8 189 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 PHYHD1Q5SRE7 291 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 WBP2NLQ6ICG8 309 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 YRDCQ86U90 279 aaKnown RBP10.72□□□□□ -0.69
SRRT-216ENST00000618262 RELL2Q8NC24 303 aaPredicted RBP10.72□□□□□ -0.69
SRRT-216ENST00000618262 ZNF675Q8TD23 568 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 FAM162AQ96A26 154 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 SEC11CQ9BY50 192 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 C20orf85Q9H1P6 137 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 WDR54Q9H977 334 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 CBLN4Q9NTU7 201 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 PEF1Q9UBV8 284 aaKnown RBP10.72□□□□□ -0.69
SRRT-216ENST00000618262 TLN1Q9Y490 2541 aaKnown RBP10.72□□□□□ -0.69
SRRT-216ENST00000618262 SIVA1O15304 175 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 TPST2O60704 377 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 GABRB1P18505 474 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 SDHBP21912 280 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 OC90Q02509 493 aaPredicted RBP10.72□□□□□ -0.69
SRRT-216ENST00000618262 TMEM255AQ5JRV8 349 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 ZNF660Q6AZW8 331 aaPredicted RBP10.72□□□□□ -0.69
SRRT-216ENST00000618262 OR4C3Q8NH37 302 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 RSPO3Q9BXY4 272 aaPredicted RBP10.72□□□□□ -0.69
SRRT-216ENST00000618262 CSAG2Q9Y5P2 127 aa10.72□□□□□ -0.69
SRRT-216ENST00000618262 ELOVL7A1L3X0 281 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 EPHA1P21709 976 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 CPT2P23786 658 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 MRPL19P49406 292 aaKnown RBP10.71□□□□□ -0.69
SRRT-216ENST00000618262 KIAA0141Q14154 515 aaPredicted RBP10.71□□□□□ -0.69
SRRT-216ENST00000618262 RTP5Q14D33 572 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 EBPQ15125 230 aaKnown RBP10.71□□□□□ -0.69
SRRT-216ENST00000618262 ENPP6Q6UWR7 440 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 B3GLCTQ6Y288 498 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 TMUB2Q71RG4 321 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 LRRTM1Q86UE6 522 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 GHSRQ92847 366 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 MALSU1Q96EH3 234 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 SLC41A3Q96GZ6 507 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 NXT1Q9UKK6 140 aaKnown RBP10.71□□□□□ -0.69
SRRT-216ENST00000618262 TRBV2A0A0J9YWF9 115 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 IGKV3-11P04433 115 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 SFTPBP07988 381 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 CXCR1P25024 350 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 GLP1RP43220 463 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 IGLV3-21P80748 117 aaPredicted RBP10.71□□□□□ -0.69
SRRT-216ENST00000618262 ZNF613Q6PF04 617 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 TMEM205Q6UW68 189 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 DEF8Q6ZN54 512 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 NFAM1Q8NET5 270 aaPredicted RBP10.71□□□□□ -0.69
SRRT-216ENST00000618262 STEAP2Q8NFT2 490 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 OR56A1Q8NGH5 318 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 OR51A7Q8NH64 312 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 JSRP1Q96MG2 331 aaPredicted RBP10.71□□□□□ -0.69
SRRT-216ENST00000618262 VSTM2LQ96N03 204 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 WWTR1Q9GZV5 400 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 ARL6Q9H0F7 186 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 ARV1Q9H2C2 271 aa10.71□□□□□ -0.69
SRRT-216ENST00000618262 C19orf25Q9UFG5 118 aaPredicted RBP10.71□□□□□ -0.69
SRRT-216ENST00000618262 YARS2Q9Y2Z4 477 aaKnown RBP10.71□□□□□ -0.69
SRRT-216ENST00000618262 TRBV7-9A0A0J9YWB2 115 aa10.71□□□□□ -0.7
SRRT-216ENST00000618262 BHLHE40O14503 412 aa10.71□□□□□ -0.7
SRRT-216ENST00000618262 AQP7O14520 342 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms