RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 HILS1P60008 231 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 GRB2P62993 217 aaKnown RBP11.24□□□□□ -0.61
CTSA-213ENST00000606782 ST3GAL4Q11206 333 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 GALEQ14376 348 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 TAF13Q15543 124 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 RBM48Q5RL73 367 aaKnown RBP11.24□□□□□ -0.61
CTSA-213ENST00000606782 DCAF12L2Q5VW00 463 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 LRRN1Q6UXK5 716 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 SPATC1Q76KD6 591 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 KCTD20Q7Z5Y7 419 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 OR5L1Q8NGL2 311 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 ZNF418Q8TF45 676 aaPredicted RBP11.24□□□□□ -0.61
CTSA-213ENST00000606782 SPTSSAQ969W0 71 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 APOBEC3DQ96AK3 386 aaPredicted RBP11.24□□□□□ -0.61
CTSA-213ENST00000606782 SIGLEC11Q96RL6 698 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 TBX5Q99593 518 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 C1QTNF5Q9BXJ0 243 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 MROQ9BYG7 248 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 NIPAL2Q9H841 368 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 OPN4Q9UHM6 478 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 MRM2Q9UI43 246 aaKnown RBP11.24□□□□□ -0.61
CTSA-213ENST00000606782 DIMT1Q9UNQ2 313 aaKnown RBP11.24□□□□□ -0.61
CTSA-213ENST00000606782 TPRKBQ9Y3C4 175 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 METTL15A6NJ78 407 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 PTGES3LE9PB15 166 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 F5H5K5 113 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 IFNL4K9M1U5 179 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 MAGEB4O15481 346 aaPredicted RBP11.23□□□□□ -0.61
CTSA-213ENST00000606782 FAM20BO75063 409 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 FOXH1O75593 365 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 FSTL3O95633 263 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 APOC1P02654 83 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 LIMS3P0CW19 117 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 LIMS4P0CW20 117 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 CPT2P23786 658 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
CTSA-213ENST00000606782 SLC35A2P78381 396 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 CDONQ4KMG0 1287 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 RNLSQ5VYX0 342 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 DRAM2Q6UX65 266 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 PLEKHG7Q6ZR37 379 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 PRSS45Q7RTY3 260 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 KRT77Q7Z794 578 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 LHFPL3Q86UP9 236 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.23□□□□□ -0.61
CTSA-213ENST00000606782 SPICQ8N5J4 248 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
CTSA-213ENST00000606782 OR2Z1Q8NG97 314 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 NANPQ8TBE9 248 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 COPS4Q9BT78 406 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 PATZ1Q9HBE1 687 aaKnown RBP11.23□□□□□ -0.61
CTSA-213ENST00000606782 ERVK13-1Q9NX77 482 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 PCDHB10Q9UN67 800 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 EXOSC1Q9Y3B2 195 aaKnown RBP11.23□□□□□ -0.61
CTSA-213ENST00000606782 LRP12Q9Y561 859 aa11.23□□□□□ -0.61
CTSA-213ENST00000606782 ACOD1A6NK06 481 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 A8MXK9 166 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 F5H0A9 414 aaPredicted RBP11.22□□□□□ -0.61
CTSA-213ENST00000606782 M0R135 149 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 PSMD9O00233 223 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 C21orf33P30042 268 aaPredicted RBP11.22□□□□□ -0.61
CTSA-213ENST00000606782 SLC6A9P48067 706 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 COMPP49747 757 aaPredicted RBP11.22□□□□□ -0.61
CTSA-213ENST00000606782 ETV1P50549 477 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 PRKXP51817 358 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 RIDAP52758 137 aaKnown RBP11.22□□□□□ -0.61
CTSA-213ENST00000606782 ZMYND11Q15326 602 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 OR8G5Q8NG78 346 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 OR13G1Q8NGZ3 307 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 FAM216AQ8WUB2 273 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 ITLN1Q8WWA0 313 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 MYDGFQ969H8 173 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 RNF166Q96A37 237 aaPredicted RBP11.22□□□□□ -0.61
CTSA-213ENST00000606782 ZNF799Q96GE5 643 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 MYCBPQ99417 103 aaPredicted RBP11.22□□□□□ -0.61
CTSA-213ENST00000606782 C7orf69Q9H7B7 122 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 GCM1Q9NP62 436 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 PAK1IP1Q9NWT1 392 aaPredicted RBP11.22□□□□□ -0.61
CTSA-213ENST00000606782 PPP1R3CQ9UQK1 317 aa11.22□□□□□ -0.61
CTSA-213ENST00000606782 ISPDA4D126 451 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 IQCF6A8MYZ5 107 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 TMEM178BH3BS89 294 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 SRSF10O75494 262 aaKnown RBP11.21□□□□□ -0.61
CTSA-213ENST00000606782 LCATP04180 440 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 KRT8P05787 483 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 CDK1P06493 297 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 ADRA2CP18825 462 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 HSD11B1P28845 292 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 MMP16P51512 607 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 OR12D2P58182 307 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 BTG1P62324 171 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 LCN2P80188 198 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 HLXQ14774 488 aaPredicted RBP11.21□□□□□ -0.61
CTSA-213ENST00000606782 ZNF181Q2M3W8 571 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 OR2T2Q6IF00 324 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 AHSA2Q719I0 299 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 SYS1Q8N2H4 156 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 STX19Q8N4C7 294 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 KLHL36Q8N4N3 616 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 DEFB108BQ8NET1 73 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms