RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CYB5AP00167 134 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 LCATP04180 440 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 CD74P04233 296 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 MMP7P09237 267 aaPredicted RBP9.08□□□□□ -0.96
VPS25-203ENST00000589520 NAT2P11245 290 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 GTF2F2P13984 249 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 B4GALT1P15291 398 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 MPZP25189 248 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 PTGFRP43088 359 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 HTR5AP47898 357 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 CCL11P51671 97 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 CCR6P51684 374 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 ARF1P84077 181 aaKnown RBP9.08□□□□□ -0.96
VPS25-203ENST00000589520 PLA2G7Q13093 441 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 KISS1Q15726 138 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 CLVS2Q5SYC1 327 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 ZNF774Q6NX45 483 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 STEAP1BQ6NZ63 245 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 ZNF782Q6ZMW2 699 aaPredicted RBP9.08□□□□□ -0.96
VPS25-203ENST00000589520 FNDC9Q8TBE3 224 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 CCDC107Q8WV48 283 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 NANOS1Q8WY41 292 aaKnown RBP9.08□□□□□ -0.96
VPS25-203ENST00000589520 SPSB4Q96A44 273 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 REEP6Q96HR9 211 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 LYZL4Q96KX0 146 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 HYLS1Q96M11 299 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 C1QTNF5Q9BXJ0 243 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 WNT5BQ9H1J7 359 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 CALHM2Q9HA72 323 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 SLC7A10Q9NS82 523 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 ZNF224Q9NZL3 707 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 CACNA1CQ13936 2221 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 UBE2QL1A1L167 161 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 FAM172BPA6NC97 362 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 ZNF736B4DX44 427 aaPredicted RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 CDC14BO60729 498 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 KDM4BO94953 1096 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 CNOT4O95628 575 aaKnown RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 RAB3DO95716 219 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 MPGP29372 298 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 RFC3P40938 356 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 EIF2S3P41091 472 aaKnown RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 GZMKP49863 264 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 NOVA1P51513 510 aaKnown RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 MRPS15P82914 257 aaKnown RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 CD83Q01151 205 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 PLP2Q04941 152 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 GFOD2Q3B7J2 385 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 CDNFQ49AH0 187 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 ACTBL2Q562R1 376 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 TMEM42Q69YG0 159 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 MTFR2Q6P444 385 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 GLDNQ6ZMI3 551 aaPredicted RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 Q6ZTK2 550 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 LHFPL2Q6ZUX7 228 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 NAA40Q86UY6 237 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 ZNF584Q8IVC4 421 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 GABRG1Q8N1C3 465 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 FAM89BQ8N5H3 189 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 CHST4Q8NCG5 386 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 FDCSPQ8NFU4 85 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 GIMAP1Q8WWP7 306 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 ASB13Q8WXK3 278 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 SARAFQ96BY9 339 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 GMPPAQ96IJ6 420 aaPredicted RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 PRRT1Q99946 306 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 TMEM59Q9BXS4 323 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 DEFB127Q9H1M4 99 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 RANGRFQ9HD47 186 aaPredicted RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 MYOZ1Q9NP98 299 aaPredicted RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.07□□□□□ -0.96
VPS25-203ENST00000589520 NPDC1Q9NQX5 325 aaPredicted RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 MRPL15Q9P015 296 aaKnown RBP9.07□□□□□ -0.96
VPS25-203ENST00000589520 SLC7A11Q9UPY5 501 aa9.07□□□□□ -0.96
VPS25-203ENST00000589520 HELZ2Q9BYK8 2649 aaKnown RBP9.06□□□□□ -0.96
VPS25-203ENST00000589520 IGKV1-9A0A0C4DH69 117 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 SLC22A20A6NK97 555 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 PRSS44E7EML9 344 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 J3QW42 95 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 AQP7O14520 342 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 DBHP09172 617 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 SULT1A3P0DMM9 295 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 SULT1A4P0DMN0 295 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 ANXA3P12429 323 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 FUT6P51993 359 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 RPS27AP62979 156 aaKnown RBP9.06□□□□□ -0.96
VPS25-203ENST00000589520 MALLQ13021 153 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 UNC119Q13432 240 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 TNK1Q13470 666 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 OR8B8Q15620 311 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 UBE2V2Q15819 145 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 LINC00303Q3SY05 128 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 PABPC1L2AQ5JQF8 200 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 ATP1A1-AS1Q5TC04 95 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 FBXW9Q5XUX1 488 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 IGFL3Q6UXB1 125 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 COLCA1Q6ZS62 124 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 P4HA3Q7Z4N8 544 aa9.06□□□□□ -0.96
VPS25-203ENST00000589520 BIVMQ86UB2 503 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms