RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GJE1A6NN92 205 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 FBXO24O75426 580 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 RPA2P15927 270 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 S100A11P31949 105 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 SMCO1Q147U7 214 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 SP6Q3SY56 376 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 SLC25A24Q6NUK1 477 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 GSG1LQ6UXU4 331 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 FNDC9Q8TBE3 224 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 CMSS1Q9BQ75 279 aaKnown RBP9.98□□□□□ -0.81
TOP3A-217ENST00000584582 HDHD3Q9BSH5 251 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-217ENST00000584582 PRMT8Q9NR22 394 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-217ENST00000584582 FTCDNL1E5RQL4 147 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 HSPA12AO43301 675 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 PPP3CBP16298 524 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 SUMO3P55854 103 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-217ENST00000584582 DSCR4P56555 118 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-217ENST00000584582 DHRS2Q13268 280 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 PPP1R1AQ13522 171 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 ZBTB37Q5TC79 503 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 MRPL21Q7Z2W9 205 aaKnown RBP9.98□□□□□ -0.81
TOP3A-217ENST00000584582 OR10R2Q8NGX6 335 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 PPA2Q9H2U2 334 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 C5orf49A4QMS7 147 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 TRAF3IP2O43734 574 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-217ENST00000584582 ZNF250P15622 560 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 PCOLCEQ15113 449 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 PDSS1Q5T2R2 415 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 PPP1R1CQ8WVI7 109 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 ASF1BQ9NVP2 202 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 MED13Q9UHV7 2174 aa9.98□□□□□ -0.81
TOP3A-217ENST00000584582 OR5H14A6NHG9 310 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 ADAP1O75689 374 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 RLN2P04090 185 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 TMUB2Q71RG4 321 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 DOK3Q7L591 496 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 EXD3Q8N9H8 876 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 OR56B1Q8NGI3 324 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 ST7LQ8TDW4 575 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 CYYR1Q96J86 154 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 VRK1Q99986 396 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-217ENST00000584582 TREM1Q9NP99 234 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 ZNF319Q9P2F9 582 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 FREM2Q5SZK8 3169 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 NPIPB7O75200 414 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 HERV-K104P61576 105 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 AIMP2Q13155 320 aaKnown RBP9.97□□□□□ -0.81
TOP3A-217ENST00000584582 SUMF1Q8NBK3 374 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 SEMA6DQ8NFY4 1073 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 LIPHQ8WWY8 451 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 REEP6Q96HR9 211 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 GSX2Q9BZM3 304 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 TWSG1Q9GZX9 223 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 CYB5R1Q9UHQ9 305 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 KLK13Q9UKR3 277 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 BOKQ9UMX3 212 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-217ENST00000584582 MUC6Q6W4X9 2439 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 C7orf66A4D0T2 115 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 A6NLC8 198 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 TOX3O15405 576 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-217ENST00000584582 RBMXL2O75526 392 aaKnown RBP9.97□□□□□ -0.81
TOP3A-217ENST00000584582 PRH1P02810 166 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 ITGB2P05107 769 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 SULT1A3P0DMM9 295 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 SULT1A4P0DMN0 295 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 ICAM2P13598 275 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 SERPINF1P36955 418 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 ZP1P60852 638 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 MEF2DQ14814 521 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 LAMTOR1Q6IAA8 161 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 CARFQ8N187 725 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 PAQR8Q8TEZ7 354 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 HGDQ93099 445 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 FAAP24Q9BTP7 215 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 ZFP64Q9NPA5 681 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 G6PC2Q9NQR9 355 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 SH3BGRL2Q9UJC5 107 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 SHANK1Q9Y566 2161 aa9.97□□□□□ -0.81
TOP3A-217ENST00000584582 RAD51DO75771 328 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 UMODP07911 640 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 GLRA1P23415 457 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 BTN1A1Q13410 526 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 ELFN2Q5R3F8 820 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 ZNF585AQ6P3V2 769 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 PDZD9Q8IXQ8 264 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 MUC3AQ02505 3323 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 TRBV5-7A0A0A0MS05 114 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 IGHV1-45A0A0A0MS14 117 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 PGA4P0DJD7 388 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 PGA3P0DJD8 388 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 LIFP15018 202 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 MMP16P51512 607 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 GK2Q14410 553 aaPredicted RBP9.96□□□□□ -0.81
TOP3A-217ENST00000584582 ATPAF1Q5TC12 328 aaPredicted RBP9.96□□□□□ -0.81
TOP3A-217ENST00000584582 SLC25A26Q70HW3 274 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 ADAD2Q8NCV1 583 aaKnown RBP9.96□□□□□ -0.81
TOP3A-217ENST00000584582 TMEM185AQ8NFB2 350 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 CLDN23Q96B33 292 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 FOXB1Q99853 325 aa9.96□□□□□ -0.81
TOP3A-217ENST00000584582 TGIF2Q9GZN2 237 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms