RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	FAM83F	Q8NEG4	500 aa	Predicted RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	OR5T2	Q8NGG2	359 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	OR4D10	Q8NGI6	311 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	OR10A6	Q8NH74	314 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	PNPT1	Q8TCS8	783 aa	Known RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZPLD1	Q8TCW7	415 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	GPR119	Q8TDV5	335 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	DOK4	Q8TEW6	326 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	CHPT1	Q8WUD6	406 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	DNAJA4	Q8WW22	397 aa	Predicted RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	LZIC	Q8WZA0	190 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	MAL2	Q969L2	176 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	C11orf52	Q96A22	123 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	TMEM45B	Q96B21	275 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	TAMM41	Q96BW9	452 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ASB9	Q96DX5	294 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZNF486	Q96H40	463 aa	Predicted RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	CXorf58	Q96LI9	332 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZFP3	Q96NJ6	502 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	TXN2	Q99757	166 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ARHGDIG	Q99819	225 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	KCTD14	Q9BQ13	255 aa	Predicted RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	SLC39A3	Q9BRY0	314 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	DCTN5	Q9BTE1	182 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZNF426	Q9BUY5	554 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	HES7	Q9BYE0	225 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SLC19A3	Q9BZV2	496 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	DSN1	Q9H410	356 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	TMEM231	Q9H6L2	316 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	MED20	Q9H944	212 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	DCAF13	Q9NV06	445 aa	Known RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	MED17	Q9NVC6	651 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ASF1B	Q9NVP2	202 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	TAS2R1	Q9NYW7	299 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	EXTL2	Q9UBQ6	330 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SEC14L3	Q9UDX4	400 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SAMD4A	Q9UPU9	718 aa	Known RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	TRAPPC4	Q9Y296	219 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SLC9A8	Q9Y2E8	581 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	KLHDC2	Q9Y2U9	406 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	HDGFL3	Q9Y3E1	203 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZNF175	Q9Y473	711 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	RNF115	Q9Y4L5	304 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SMG1	Q96Q15	3661 aa	Known RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	FER1L5	A0AVI2	2057 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SNRNP200	O75643	2136 aa	Known RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	ATRX	P46100	2492 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453		A0A087WUJ7	227 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453		A0A0B4J2E0	115 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453		A0A0U1RQV5	110 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453		A0A1B0GUH1	482 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	LOC102725191	A0A1B0GVB3	256 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453		A0A1B0GX12	115 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	TRAPPC13	A5PLN9	417 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	RNF222	A6NCQ9	220 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	FAM166B	A8MTA8	275 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	NPIPA5	E9PKD4	350 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	SOCS3	O14543	225 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	GYG2	O15488	501 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	CHP2	O43745	196 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	OR2T1	O43869	369 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	EIF1B	O60739	113 aa	Known RBP	2.55	□□□□□ -2
MSI2-215	ENST00000582453	SLC19A2	O60779	497 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	NPIPB7	O75200	414 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	VAMP5	O95183	116 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	OR5F1	O95221	314 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	EPPIN	O95925	133 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	F10	P00742	488 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	IFNW1	P05000	195 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	UBTFL6	P0CB48	400 aa	Predicted RBP	2.55	□□□□□ -2
MSI2-215	ENST00000582453	UMPS	P11172	480 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	ME2	P23368	584 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	IFNA8	P32881	189 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	RBM34	P42696	430 aa	Known RBP	2.55	□□□□□ -2
MSI2-215	ENST00000582453	MAGEA2	P43356	314 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	RFX3	P48380	749 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	LHX2	P50458	406 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	POLR2H	P52434	150 aa	Known RBP	2.55	□□□□□ -2
MSI2-215	ENST00000582453	TMEM50B	P56557	158 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	CLDN18	P56856	261 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	RGS8	P57771	180 aa	Predicted RBP	2.55	□□□□□ -2
MSI2-215	ENST00000582453	COPZ1	P61923	177 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	MYBPC1	Q00872	1141 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	CACNA1B	Q00975	2339 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	DMTN	Q08495	405 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	FOXF1	Q12946	379 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	QPRT	Q15274	297 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	DUSP7	Q16829	419 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	LRRC23	Q53EV4	343 aa	Predicted RBP	2.55	□□□□□ -2
MSI2-215	ENST00000582453	CYBRD1	Q53TN4	286 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	LIPK	Q5VXJ0	399 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	GLYAT	Q6IB77	296 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	OR2A2	Q6IF42	318 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	SLC25A24	Q6NUK1	477 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	ULK3	Q6PHR2	472 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	CBLN3	Q6UW01	205 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	CCDC121	Q6ZUS5	278 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	ASRGL1	Q7L266	308 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	VRK2	Q86Y07	508 aa		2.55	□□□□□ -2
MSI2-215	ENST00000582453	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms