RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GVQW1Q8N7I0 195 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 OR52B4Q8NGK2 314 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 OR10R2Q8NGX6 335 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 PIGTQ969N2 578 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 SELENOIQ9C0D9 397 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 EMC3Q9P0I2 261 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 MCTS1Q9ULC4 181 aaKnown RBP16.68■□□□□ 0.26
SMPD3-203ENST00000563226 MEIKINA0A087WXM9 373 aa16.67■□□□□ 0.26
SMPD3-203ENST00000563226 FAM172BPA6NC97 362 aa16.67■□□□□ 0.26
SMPD3-203ENST00000563226 RAB3DO95716 219 aa16.67■□□□□ 0.26
SMPD3-203ENST00000563226 LCATP04180 440 aa16.67■□□□□ 0.26
SMPD3-203ENST00000563226 TNK1Q13470 666 aa16.67■□□□□ 0.26
SMPD3-203ENST00000563226 TRAPPC6BQ86SZ2 158 aa16.67■□□□□ 0.26
SMPD3-203ENST00000563226 REEP6Q96HR9 211 aa16.67■□□□□ 0.26
SMPD3-203ENST00000563226 ARHGAP21Q5T5U3 1957 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 SOCS1O15524 211 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 CYB5AP00167 134 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 ARF1P84077 181 aaKnown RBP16.66■□□□□ 0.26
SMPD3-203ENST00000563226 PMP22Q01453 160 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 SLC10A1Q14973 349 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 SLC36A1Q7Z2H8 476 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 FAM109AQ8N4B1 249 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 PP6455Q8WZ26 134 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 HAS2Q92819 552 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 TRAF4Q9BUZ4 470 aaPredicted RBP16.66■□□□□ 0.26
SMPD3-203ENST00000563226 PRRG4Q9BZD6 226 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 LINC00470Q9BZP3 86 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 NPDC1Q9NQX5 325 aaPredicted RBP16.66■□□□□ 0.26
SMPD3-203ENST00000563226 GPR173Q9NS66 373 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 CFAP47Q6ZTR5 3102 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 AKR7A2O43488 359 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 MTRF1O75570 445 aaKnown RBP16.66■□□□□ 0.26
SMPD3-203ENST00000563226 CRTAPO75718 401 aaPredicted RBP16.66■□□□□ 0.26
SMPD3-203ENST00000563226 RLN1P04808 185 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 MELTFP08582 738 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 ZNF735P0CB33 412 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 LIPCP11150 499 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 SOX8P57073 446 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 SNRPD2P62316 118 aaKnown RBP16.66■□□□□ 0.26
SMPD3-203ENST00000563226 PLAC9Q5JTB6 97 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 ZNF584Q8IVC4 421 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 CPEB3Q8NE35 698 aaKnown RBP16.66■□□□□ 0.26
SMPD3-203ENST00000563226 KCNG3Q8TAE7 436 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 TMEM59Q9BXS4 323 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 EXO5Q9H790 373 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 ACKR4Q9NPB9 350 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 SPRR3Q9UBC9 169 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 ZNF69Q9UC07 566 aa16.66■□□□□ 0.26
SMPD3-203ENST00000563226 A0A096LPE4 126 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 A0A1W2PPZ6 126 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 ZNF736B4DX44 427 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-203ENST00000563226 ZNHIT1O43257 154 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 SSX5O60225 188 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 IL5P05113 134 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 FCGR2AP12318 317 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-203ENST00000563226 PTGFRP43088 359 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 RRADP55042 308 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 PCBD1P61457 104 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 BCL2A1Q16548 175 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 PABPC1L2AQ5JQF8 200 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 ZNF626Q68DY1 528 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 OR52W1Q6IF63 320 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 CHMP1BQ7LBR1 199 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 ASCC1Q8N9N2 400 aaKnown RBP16.65■□□□□ 0.26
SMPD3-203ENST00000563226 SEMA6DQ8NFY4 1073 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 OR11H4Q8NGC9 324 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 CHST6Q9GZX3 395 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 BCO1Q9HAY6 547 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 DLL4Q9NR61 685 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 B3GNT2Q9NY97 397 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 ZNF292O60281 2723 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 PRR33A8MZF0 331 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 CD74P04233 296 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 AMY2AP04746 511 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 CCL11P51671 97 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 NUFIP2Q7Z417 695 aaKnown RBP16.65■□□□□ 0.26
SMPD3-203ENST00000563226 OR10K1Q8NGX5 313 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 CA10Q9NS85 328 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 KCNK7Q9Y2U2 307 aa16.65■□□□□ 0.26
SMPD3-203ENST00000563226 FARS2O95363 451 aaKnown RBP16.64■□□□□ 0.25
SMPD3-203ENST00000563226 CSN2P05814 226 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 GSTT2P0CG29 244 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 NAT2P11245 290 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 TNFSF10P50591 281 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 TMEM50BP56557 158 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 IDO2Q6ZQW0 420 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 PNLDC1Q8NA58 520 aaKnown RBP16.64■□□□□ 0.25
SMPD3-203ENST00000563226 FDCSPQ8NFU4 85 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 TNFAIP8L1Q8WVP5 186 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 MED30Q96HR3 178 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 SLC6A7Q99884 636 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 ZNF436Q9C0F3 470 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-203ENST00000563226 LDAHQ9H6V9 325 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 PARPBPQ9NWS1 579 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 ING4Q9UNL4 249 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 NPTNQ9Y639 398 aa16.64■□□□□ 0.25
SMPD3-203ENST00000563226 SPENQ96T58 3664 aaKnown RBP16.63■□□□□ 0.25
SMPD3-203ENST00000563226 ZNF503-AS2A6NEH8 195 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 ZNF724A8MTY0 619 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms