RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PMPCAQ10713 525 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 ADGRE4PQ86SQ3 457 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 CD163Q86VB7 1156 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF441Q8N8Z8 693 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 SNIP1Q8TAD8 396 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 TAAR8Q969N4 342 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 KLK13Q9UKR3 277 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 SDK1Q7Z5N4 2213 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 CABIN1Q9Y6J0 2220 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 A0A087X0M5 115 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 A0A1B0GX30 115 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 C17orf51A8MQB3 221 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 H0YIZ8 118 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 MKRN2OSH3BPM6 223 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 PSMD9O00233 223 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 GMFGO60234 142 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 YIF1AO95070 293 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 F13BP05160 661 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 RNF4P78317 190 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 RPL18Q07020 188 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 TOMM34Q15785 309 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 TMEM268Q5VZI3 342 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 FDX2Q6P4F2 183 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 Q6ZRG5 221 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 CDC20BQ86Y33 519 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 CASTOR1Q8WTX7 329 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 IP6K3Q96PC2 410 aa12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 GDF2Q9UK05 429 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-220ENST00000560998 A0A1W2PPC1 479 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 ERCC1P07992 297 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 CD37P11049 281 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 LIPCP11150 499 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 RAB4AP20338 218 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 TGIF1Q15583 401 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 EMC4Q5J8M3 183 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 HIST2H3PS2Q5TEC6 136 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 LANCL3Q6ZV70 420 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 COX15Q7KZN9 410 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 ZNF511Q8NB15 262 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 ACBD4Q8NC06 268 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 PLPP5Q8NEB5 264 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 TSEN15Q8WW01 171 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 MAFIPQ8WZ33 124 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 ZNF775Q96BV0 537 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 GALNT14Q96FL9 552 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 TSSK2Q96PF2 358 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 TSPAN32Q96QS1 320 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 TBL1XR1Q9BZK7 514 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 OR2S2Q9NQN1 319 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 ZNF346Q9UL40 294 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 TMED7Q9Y3B3 224 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 HDGFL3Q9Y3E1 203 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 TMEM14AQ9Y6G1 99 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 TRIOBPQ9H2D6 2365 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 A0A087WV48 116 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 MSGN1A6NI15 193 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 KCNAB3O43448 404 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 JTBO76095 146 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 TSPAN15O95858 294 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 BGLAPP02818 100 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 SERPINA5P05154 406 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 CXCR1P25024 350 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 HTR2CP28335 458 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 GRPRP30550 384 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 SNCAP37840 140 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 ZNF574Q6ZN55 896 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 OR5R1Q8NH85 324 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 RNF128Q8TEB7 428 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 MRGPRFQ96AM1 343 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 C4orf45Q96LM5 186 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 SPACA1Q9HBV2 294 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 GRHPRQ9UBQ7 328 aa12.39□□□□□ -0.43
RABGGTA-220ENST00000560998 DCTN6O00399 190 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 AGPAT2O15120 278 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 TCAPO15273 167 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 OR8U9P0C7N5 309 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 GP1BBP13224 206 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 FSTP19883 344 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 RAB6AP20340 208 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 RAP1AP62834 184 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 FAM3AP98173 230 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 RSU1Q15404 277 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 MESTQ5EB52 335 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 KDM8Q8N371 416 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 ARL6IP6Q8N6S5 226 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 ZNF610Q8N9Z0 462 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 UBAC2Q8NBM4 344 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 OR8U1Q8NH10 309 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 AQP3Q92482 292 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 RAB24Q969Q5 203 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 SMDT1Q9H4I9 107 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 CKLFQ9UBR5 152 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 ATXN7L1Q9ULK2 861 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 PCNX3Q9H6A9 2034 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 TRAV36DV7A0A075B6V5 113 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 UMAD1C9J7I0 102 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 ZNF587BE7ETH6 402 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 LDLRAD4O15165 306 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms