RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 HILS1P60008 231 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 FGF12P61328 243 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 PAX2Q02962 417 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 PRDX4Q13162 271 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 SCGB2A2Q13296 93 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 SLC35D3Q5M8T2 416 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 BTNL3Q6UXE8 466 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 C12orf54Q6X4T0 127 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 ZNF841Q6ZN19 808 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 DCDC5Q6ZRR9 648 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 NLRC3Q7RTR2 1065 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 COMMD2Q86X83 199 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 FAM90A1Q86YD7 464 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 TEX29Q8N6K0 151 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 OR1M1Q8NGA1 313 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 OR5T2Q8NGG2 359 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 OR52H1Q8NGJ2 320 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 RPL3LQ92901 407 aaKnown RBP10.42□□□□□ -0.74
SMAD3-208ENST00000558827 ERGIC1Q969X5 290 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 NRBF2Q96F24 287 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 ZNF48Q96MX3 618 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-208ENST00000558827 TBX5Q99593 518 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 CCL13Q99616 98 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 APOL4Q9BPW4 351 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 SUCNR1Q9BXA5 334 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 FGF23Q9GZV9 251 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-208ENST00000558827 MS4A7Q9GZW8 240 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-208ENST00000558827 SP140LQ9H930 580 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 SMURF1Q9HCE7 757 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 TNFRSF19Q9NS68 423 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 SNTG1Q9NSN8 517 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 C14orf119Q9NWQ9 140 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 IKZF2Q9UKS7 526 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 GTF2A1LQ9UNN4 478 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 POLR3KQ9Y2Y1 108 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-208ENST00000558827 NOP16Q9Y3C1 178 aaKnown RBP10.42□□□□□ -0.74
SMAD3-208ENST00000558827 A0A0A6YYJ9 748 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 TRAV40A0A0B4J280 105 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 OOEPA6NGQ2 149 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 H3BSH0 61 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 TRIM77I1YAP6 450 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 CDIPTO14735 213 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 FCN3O75636 299 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 CIB2O75838 187 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 SFTPBP07988 381 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 HOXB6P17509 224 aaKnown RBP10.41□□□□□ -0.74
SMAD3-208ENST00000558827 DDOSTP39656 456 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 RASSF2P50749 326 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 PRB3Q04118 309 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-208ENST00000558827 RUSC1-AS1Q66K80 236 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 BRD3OSQ6XYD6 125 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 SPERTQ8NA61 448 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 PYDC1Q8WXC3 89 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 GCDHQ92947 438 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-208ENST00000558827 RNF170Q96K19 258 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 FAM71F1Q96KD3 344 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-208ENST00000558827 MICU1Q9BPX6 476 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 PCGF1Q9BSM1 259 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 YIPF3Q9GZM5 350 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 RIBC2Q9H4K1 309 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 OPA3Q9H6K4 179 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 H2AFY2Q9P0M6 372 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-208ENST00000558827 ERVK-18Q9QC07 812 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 ANK2Q01484 3957 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 NBEAL1Q6ZS30 2694 aa10.41□□□□□ -0.74
SMAD3-208ENST00000558827 TRAV38-1A0A0B4J264 116 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 KIR2DS1A0A191URI9 304 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 TMEM269A0A1B0GVZ9 245 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 ATP5HO75947 161 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 PTBP3O95758 552 aaKnown RBP10.4□□□□□ -0.74
SMAD3-208ENST00000558827 SELLP14151 372 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 PSMB10P40306 273 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 PSMA6P60900 246 aaKnown RBP10.4□□□□□ -0.74
SMAD3-208ENST00000558827 ESRRGP62508 458 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 MFGE8Q08431 387 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-208ENST00000558827 CEP78Q5JTW2 689 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 SLX4IPQ5VYV7 408 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 WDR82Q6UXN9 313 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 RBMS3Q6XE24 437 aaKnown RBP10.4□□□□□ -0.74
SMAD3-208ENST00000558827 MEPCEQ7L2J0 689 aaKnown RBP10.4□□□□□ -0.74
SMAD3-208ENST00000558827 ZDHHC13Q8IUH4 622 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 PDZD9Q8IXQ8 264 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 SLC35F2Q8IXU6 374 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 PARP8Q8N3A8 854 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 FAM81AQ8TBF8 368 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 OR51E1Q8TCB6 317 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 ST8SIA4Q92187 359 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 CIB1Q99828 191 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 PKP2Q99959 881 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 WDR13Q9H1Z4 485 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 DNAJB11Q9UBS4 358 aa10.4□□□□□ -0.74
SMAD3-208ENST00000558827 A6NIN4 97 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 ANXA2P2A6NMY6 339 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 ZAR1LA6NP61 321 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 DVL1O14640 695 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 TNFRSF13BO14836 293 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-208ENST00000558827 TMPRSS2O15393 492 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 AKR7A2O43488 359 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 LHBP01229 141 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms