RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 OR52N1Q8NH53 320 aa16.47■□□□□ 0.23
DDX55-207ENST00000540763 MEGF10Q96KG7 1140 aa16.47■□□□□ 0.23
DDX55-207ENST00000540763 OR2V2Q96R30 315 aa16.47■□□□□ 0.23
DDX55-207ENST00000540763 TMUB1Q9BVT8 246 aa16.47■□□□□ 0.23
DDX55-207ENST00000540763 SLC22A13Q9Y226 551 aa16.47■□□□□ 0.23
DDX55-207ENST00000540763 CR1P17927 2039 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 IGHV4-30-2A0A087WSY4 118 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.46■□□□□ 0.23
DDX55-207ENST00000540763 ZNF816-ZNF321PA0A0X1KG74 233 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 A0A1B0GTI1 187 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 PTBP3O95758 552 aaKnown RBP16.46■□□□□ 0.23
DDX55-207ENST00000540763 ISG15P05161 165 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 ETV1P50549 477 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 GBX2P52951 348 aaPredicted RBP16.46■□□□□ 0.23
DDX55-207ENST00000540763 TMEM33P57088 247 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 SLC3A1Q07837 685 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 HFEQ30201 348 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 CCDC58Q4VC31 144 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 RNLSQ5VYX0 342 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 PRSS35Q8N3Z0 413 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 STX19Q8N4C7 294 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 SEMA6DQ8NFY4 1073 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 ITLN1Q8WWA0 313 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 YIPF5Q969M3 257 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 ERGIC1Q969X5 290 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 PPP1R14AQ96A00 147 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 ISG20L2Q9H9L3 353 aaKnown RBP16.46■□□□□ 0.23
DDX55-207ENST00000540763 TPRKBQ9Y3C4 175 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 V9GYS6 101 aa16.46■□□□□ 0.23
DDX55-207ENST00000540763 A0A1B0GVI7 797 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 H0YL77 283 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 DENRO43583 198 aaKnown RBP16.45■□□□□ 0.22
DDX55-207ENST00000540763 HLA-DPB1P04440 258 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 COL8A2P25067 703 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 GNALP38405 381 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 PSMB10P40306 273 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 KIR3DL2P43630 455 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 RIPPLY1Q0D2K3 151 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 ALKBH1Q13686 389 aaKnown RBP16.45■□□□□ 0.22
DDX55-207ENST00000540763 ZNF181Q2M3W8 571 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 TMEM244Q5VVB8 128 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 MYDGFQ969H8 173 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 C10orf35Q96D05 121 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 FAM71F1Q96KD3 344 aaPredicted RBP16.45■□□□□ 0.22
DDX55-207ENST00000540763 SOX7Q9BT81 388 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 PAPOLGQ9BWT3 736 aaKnown RBP16.45■□□□□ 0.22
DDX55-207ENST00000540763 ZNF275Q9NSD4 429 aaPredicted RBP16.45■□□□□ 0.22
DDX55-207ENST00000540763 C14orf119Q9NWQ9 140 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 FRRS1LQ9P0K9 344 aa16.45■□□□□ 0.22
DDX55-207ENST00000540763 VPS13CQ709C8 3753 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 TRIM64A6NGJ6 449 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 TRIM64BA6NI03 449 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 ANXA2P2A6NMY6 339 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 F5H5P2 479 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 P2RY10O00398 339 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 CDK1P06493 297 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 FOSL1P15407 271 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 NR4A2P43354 598 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 NANOS3P60323 173 aaKnown RBP16.44■□□□□ 0.22
DDX55-207ENST00000540763 SLC35A2P78381 396 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 MAB21L1Q13394 359 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 CARTPTQ16568 116 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 RBM48Q5RL73 367 aaKnown RBP16.44■□□□□ 0.22
DDX55-207ENST00000540763 OR14K1Q8NGZ2 314 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 COX4I2Q96KJ9 171 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 CNBD2Q96M20 576 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 ENPP5Q9UJA9 477 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 BLOC1S6Q9UL45 172 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 PPP1R3CQ9UQK1 317 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 RHBDD3Q9Y3P4 386 aa16.44■□□□□ 0.22
DDX55-207ENST00000540763 MAP1AP78559 2803 aaPredicted RBP16.44■□□□□ 0.22
DDX55-207ENST00000540763 YLPM1P49750 1951 aaKnown RBP16.44■□□□□ 0.22
DDX55-207ENST00000540763 A0A096LNT2 108 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 LOC107986453A0A1B0GWG9 222 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 TMEM212A6NML5 194 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 OR4C45A6NMZ5 311 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 CLDN25C9JDP6 229 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 SYT7O43581 403 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 MVKQ03426 396 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 SPRNQ5BIV9 151 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 ZNF485Q8NCK3 441 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 OR8S1Q8NH09 359 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 Q8TCH9 128 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 RPS4Y2Q8TD47 263 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 ITPKCQ96DU7 683 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 CDCA4Q9BXL8 241 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 REG4Q9BYZ8 158 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 BPESC1Q9GZL8 116 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 DUSP21Q9H596 190 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 GCM1Q9NP62 436 aa16.43■□□□□ 0.22
DDX55-207ENST00000540763 LYNX1G3V0Z9 82 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 MYL12BO14950 172 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 CDC14BO60729 498 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 LYNX1P0DP58 116 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 CRHBPP24387 322 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 GPR6P46095 362 aaPredicted RBP16.42■□□□□ 0.22
DDX55-207ENST00000540763 CDH15P55291 814 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 LOXL1Q08397 574 aaPredicted RBP16.42■□□□□ 0.22
DDX55-207ENST00000540763 PRDX4Q13162 271 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 OR2G6Q5TZ20 316 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms