RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 IP6K3Q96PC2 410 aa15.6■□□□□ 0.09
RAB40C-205ENST00000539661 PBOV1Q9GZY1 135 aa15.6■□□□□ 0.09
RAB40C-205ENST00000539661 CENPMQ9NSP4 180 aa15.6■□□□□ 0.09
RAB40C-205ENST00000539661 B3GALT5Q9Y2C3 310 aa15.6■□□□□ 0.09
RAB40C-205ENST00000539661 MRPS28Q9Y2Q9 187 aaKnown RBP15.6■□□□□ 0.09
RAB40C-205ENST00000539661 ALPK2Q86TB3 2170 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 FREM3P0C091 2139 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 CDC14BO60729 498 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 DEDDO75618 318 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 NUDT14O95848 222 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 HOXB5P09067 269 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 SEC11BP0C7V7 166 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 PI3P19957 117 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 HNRNPA2B1P22626 353 aaKnown RBP15.59■□□□□ 0.09
RAB40C-205ENST00000539661 OR3A2P47893 321 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 HTR5AP47898 357 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 YPEL5P62699 121 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 FOXK1P85037 733 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 OR2A2Q6IF42 318 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 YAF2Q8IY57 180 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 GPBAR1Q8TDU6 330 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 PTPMT1Q8WUK0 201 aaPredicted RBP15.59■□□□□ 0.09
RAB40C-205ENST00000539661 ISOC2Q96AB3 205 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 MRPL38Q96DV4 380 aaKnown RBP15.59■□□□□ 0.09
RAB40C-205ENST00000539661 PLEKHA2Q9HB19 425 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 SPACA1Q9HBV2 294 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 SUSD2Q9UGT4 822 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 TUBD1Q9UJT1 453 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 DOCK8Q8NF50 2099 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 ALG1L2C9J202 215 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 SOCS1O15524 211 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 AHSA1O95433 338 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 MPIG6BO95866 241 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 SFTPBP07988 381 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 SULT1A1P50225 295 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 SUCLG1P53597 346 aaKnown RBP15.59■□□□□ 0.09
RAB40C-205ENST00000539661 SPEM2Q0P670 501 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 AVL9Q8NBF6 648 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 SLC37A2Q8TED4 501 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 C1orf147Q96MC9 270 aaPredicted RBP15.59■□□□□ 0.09
RAB40C-205ENST00000539661 PRRX2Q99811 253 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 MESP1Q9BRJ9 268 aa15.59■□□□□ 0.09
RAB40C-205ENST00000539661 hCG_1809904A0A1W2PP81 198 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 A0A1W2PR64 198 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 A0A1W2PRV1 198 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 GMFGO60234 142 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 DANCRP0C864 163 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 ZNF20P17024 532 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 NTSR1P30989 418 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 ECI1P42126 302 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 ZNF84P51523 738 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 TMEM33P57088 247 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 DCAF7P61962 342 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 IAH1Q2TAA2 248 aaPredicted RBP15.58■□□□□ 0.08
RAB40C-205ENST00000539661 MIDNQ504T8 468 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 ASB10Q8WXI3 467 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 GABRG3Q99928 467 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 TMEM59Q9BXS4 323 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.58■□□□□ 0.08
RAB40C-205ENST00000539661 LUZP4Q9P127 313 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 AMDHD2Q9Y303 409 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 LRP4O75096 1905 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 NPIPB13A6NJU9 1138 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 NPIPB4C9JG80 1138 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 IFNA2P01563 188 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 GLRA1P23415 457 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 IL12BP29460 328 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 RBMXP38159 391 aaKnown RBP15.58■□□□□ 0.08
RAB40C-205ENST00000539661 DAP3P51398 398 aaKnown RBP15.58■□□□□ 0.08
RAB40C-205ENST00000539661 TMEM50BP56557 158 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 ZP4Q12836 540 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 ZNF321PQ8N8H1 164 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 ADIPOR1Q96A54 375 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 MMABQ96EY8 250 aaPredicted RBP15.58■□□□□ 0.08
RAB40C-205ENST00000539661 URM1Q9BTM9 101 aaKnown RBP15.58■□□□□ 0.08
RAB40C-205ENST00000539661 TOLLIPQ9H0E2 274 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 MOB1AQ9H8S9 216 aa15.58■□□□□ 0.08
RAB40C-205ENST00000539661 C14orf166Q9Y224 244 aaKnown RBP15.58■□□□□ 0.08
RAB40C-205ENST00000539661 RAD51DO75771 328 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 TMEM196Q5HYL7 178 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 ADAM5Q6NVV9 412 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 GRINAQ7Z429 371 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 FAM24BQ8N5W8 94 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 TMEM104Q8NE00 496 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 SNIP1Q8TAD8 396 aaKnown RBP15.57■□□□□ 0.08
RAB40C-205ENST00000539661 SLAMF6Q96DU3 332 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 RSRP1Q9BUV0 290 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 GGACTQ9BVM4 153 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 TREM2Q9NZC2 230 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 SOX1O00570 391 aaPredicted RBP15.57■□□□□ 0.08
RAB40C-205ENST00000539661 TNFP01375 233 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 TMEM31Q5JXX7 168 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 FNDC9Q8TBE3 224 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 KCNK17Q96T54 332 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 OPA3Q9H6K4 179 aa15.57■□□□□ 0.08
RAB40C-205ENST00000539661 UMAD1C9J7I0 102 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 ARFRP1Q13795 201 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 COL19A1Q14993 1142 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 SHHQ15465 462 aa15.56■□□□□ 0.08
RAB40C-205ENST00000539661 TGIF1Q15583 401 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms