RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 MTRF1O75570 445 aaKnown RBP11.69□□□□□ -0.54
CD44-224ENST00000526669 ISG15P05161 165 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 ZNF20P17024 532 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 LIPAP38571 399 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 EVX1P49640 407 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 ZNF81P51508 661 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 RIPPLY1Q0D2K3 151 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 PRDX4Q13162 271 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 TPBGQ13641 420 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 INSL4Q14641 139 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 CSNK2A3Q8NEV1 391 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 OR2Z1Q8NG97 314 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 TMEM203Q969S6 136 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 FGGYQ96C11 551 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 ADAT3Q96EY9 351 aaPredicted RBP11.69□□□□□ -0.54
CD44-224ENST00000526669 ADAT1Q9BUB4 502 aaKnown RBP11.69□□□□□ -0.54
CD44-224ENST00000526669 ENPP5Q9UJA9 477 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 DHDHQ9UQ10 334 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 ASH1LQ9NR48 2969 aaKnown RBP11.69□□□□□ -0.54
CD44-224ENST00000526669 IGHV3-64DA0A0J9YX35 117 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 ZNF816-ZNF321PA0A0X1KG74 233 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 A0A1W2PPK0 400 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 LOC390937A0A1W2PQ73 354 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 ANKRD61A6NGH8 418 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 IGHV1-46P01743 117 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 OCM2P0CE71 109 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 CD53P19397 219 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 GNALP38405 381 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 DDOSTP39656 456 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 RPS11P62280 158 aaKnown RBP eCLIP11.68□□□□□ -0.54
CD44-224ENST00000526669 HNRNPA0Q13151 305 aaKnown RBP11.68□□□□□ -0.54
CD44-224ENST00000526669 OR8G1Q15617 311 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 MOGQ16653 247 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 SPRNQ5BIV9 151 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 CEP78Q5JTW2 689 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 Q6ZSR3 168 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 MOB3CQ70IA8 216 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 PHC2Q8IXK0 858 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 GPR148Q8TDV2 347 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 NPRL2Q8WTW4 380 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 ELMOD3Q96FG2 381 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 OR14A2Q96R54 314 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 SLC30A2Q9BRI3 323 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 TMEM100Q9NV29 134 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 PMF1-BGLAPU3KQ54 211 aa11.68□□□□□ -0.54
CD44-224ENST00000526669 TRBV5-5A0A0J9YX44 114 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 C17orf100A8MU93 164 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 F5H5P2 479 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 CCRL2O00421 344 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 NDUFS7O75251 213 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 NCR1O76036 304 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 RAF1P04049 648 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 CD1AP06126 327 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 PPOXP50336 477 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 YIF1BQ5BJH7 314 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 SYT6Q5T7P8 510 aaPredicted RBP11.67□□□□□ -0.54
CD44-224ENST00000526669 PLCXD3Q63HM9 321 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 OR13G1Q8NGZ3 307 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 UBASH3BQ8TF42 649 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 LURAP1Q96LR2 239 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 SORCS2Q96PQ0 1159 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 ZNF275Q9NSD4 429 aaPredicted RBP11.67□□□□□ -0.54
CD44-224ENST00000526669 MRPL15Q9P015 296 aaKnown RBP11.67□□□□□ -0.54
CD44-224ENST00000526669 SF3B6Q9Y3B4 125 aaKnown RBP11.67□□□□□ -0.54
CD44-224ENST00000526669 NAV2Q8IVL1 2488 aa11.67□□□□□ -0.54
CD44-224ENST00000526669 TPD52L2O43399 206 aaKnown RBP11.66□□□□□ -0.54
CD44-224ENST00000526669 LY6HO94772 140 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 NRASP01111 189 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 ZNF12P17014 697 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 JUNBP17275 347 aaPredicted RBP11.66□□□□□ -0.54
CD44-224ENST00000526669 TGFBR2P37173 567 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 RBMXP38159 391 aaKnown RBP11.66□□□□□ -0.54
CD44-224ENST00000526669 CCL8P80075 99 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 GPR50Q13585 617 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 Q499Y3 187 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 CLVS2Q5SYC1 327 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 FAM27D1Q5T7N8 215 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 ZDHHC23Q8IYP9 409 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 CCDC54Q8NEL0 328 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 OR13C9Q8NGT0 318 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 TRMT10AQ8TBZ6 339 aaKnown RBP11.66□□□□□ -0.54
CD44-224ENST00000526669 ITLN1Q8WWA0 313 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 IGFBPL1Q8WX77 278 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 PIGTQ969N2 578 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 TMEM106AQ96A25 262 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 TMIGD2Q96BF3 282 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 FGF23Q9GZV9 251 aaPredicted RBP11.66□□□□□ -0.54
CD44-224ENST00000526669 CYSLTR2Q9NS75 346 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 NDUFB11Q9NX14 153 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 TAS2R4Q9NYW5 299 aa11.66□□□□□ -0.54
CD44-224ENST00000526669 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.54
CD44-224ENST00000526669 CCDC168Q8NDH2 2452 aa11.65□□□□□ -0.54
CD44-224ENST00000526669 DHRS7CA6NNS2 312 aa11.65□□□□□ -0.54
CD44-224ENST00000526669 ZNF879B4DU55 563 aa11.65□□□□□ -0.54
CD44-224ENST00000526669 OVOL3O00110 214 aa11.65□□□□□ -0.54
CD44-224ENST00000526669 GABRPO00591 440 aa11.65□□□□□ -0.54
CD44-224ENST00000526669 GMDSO60547 372 aa11.65□□□□□ -0.54
CD44-224ENST00000526669 RGS9O75916 674 aaPredicted RBP11.65□□□□□ -0.54
CD44-224ENST00000526669 CST4P01036 141 aa11.65□□□□□ -0.54
CD44-224ENST00000526669 CD2P06729 351 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms