RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 GUCA2AQ02747 115 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 FUT7Q11130 342 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 MLLT11Q13015 90 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CEACAM7Q14002 265 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 GPR18Q14330 331 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 PRSS8Q16651 343 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 ARHGAP11BQ3KRB8 267 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 TFDP3Q5H9I0 405 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 TIMM23BQ5SRD1 257 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM268Q5VZI3 342 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 FRRS1Q6ZNA5 592 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 COX15Q7KZN9 410 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 SERPINA11Q86U17 422 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 DOLPP1Q86YN1 238 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 HIST3H2BBQ8N257 126 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CBR4Q8N4T8 237 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 OR9I1Q8NGQ6 314 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 ABHD4Q8TB40 342 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 NUDCD2Q8WVJ2 157 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 ST8SIA1Q92185 356 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 PHYHIPLQ96FC7 376 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 PEBP4Q96S96 227 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 KCTD15Q96SI1 283 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 DPH2Q9BQC3 489 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 FAAP24Q9BTP7 215 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 APOOQ9BUR5 198 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 LRRC61Q9BV99 259 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 SPATA5L1Q9BVQ7 753 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 PRR14Q9BWN1 585 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 RBM24Q9BX46 236 aaKnown RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 METTL17Q9H7H0 456 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 SRD5A3Q9H8P0 318 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 UBQLN4Q9NRR5 601 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 PHPT1Q9NRX4 125 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 SPANXCQ9NY87 97 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 B3GAT1Q9P2W7 334 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 PRODH2Q9UF12 536 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CGGBP1Q9UFW8 167 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 IKZF2Q9UKS7 526 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 PSG8Q9UQ74 426 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 RAP2CQ9Y3L5 183 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CELSR3Q9NYQ7 3312 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 ATRXP46100 2492 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 CROCCQ5TZA2 2017 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 LOC100289279A0A1B0GTE1 492 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 TVP23AA6NH52 213 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 HMSDA8MTL9 139 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 RBFOX2O43251 390 aaKnown RBP eCLIP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 DLX3O60479 287 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 TOX4O94842 621 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 SCELO95171 688 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 IFNA1P01562 189 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 H2AFZP0C0S5 128 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 FCGR2AP12318 317 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 FAHP16930 419 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 ARRB2P32121 409 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 APLNRP35414 380 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 POLR2IP36954 125 aaKnown RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 MAP2K3P46734 347 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 CDH12P55289 794 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 TMPRSS3P57727 454 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 TIRAPP58753 221 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 TAS2R43P59537 309 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 RUNX1Q01196 453 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 SLC25A11Q02978 314 aaKnown RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 MZT1Q08AG7 82 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 C2orf80Q0P641 193 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 PDCD1Q15116 288 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 IQCJQ1A5X6 159 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 DEFB133Q30KQ1 61 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 NRN1LQ496H8 165 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 ALG10BQ5I7T1 473 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 LDLRAD2Q5SZI1 272 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 MOB3CQ70IA8 216 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 H2AFVQ71UI9 128 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 TRIM48Q8IWZ4 208 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 IZUMO1Q8IYV9 350 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 PELI3Q8N2H9 469 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 ARHGEF39Q8N4T4 335 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 SIRT6Q8N6T7 355 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 NPWQ8N729 165 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM116Q8NCL8 245 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 ST6GALNAC3Q8NDV1 305 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 LFNGQ8NES3 379 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 OR56A4Q8NGH8 313 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF564Q8TBZ8 553 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 GPR119Q8TDV5 335 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 PCNPQ8WW12 178 aaKnown RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 GGHQ92820 318 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 NUS1Q96E22 293 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 LIN37Q96GY3 246 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 MIEN1Q9BRT3 115 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 QTRT1Q9BXR0 403 aaKnown RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 MEGF9Q9H1U4 602 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 FBXO6Q9NRD1 293 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 BEX4Q9NWD9 120 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 GPATCH2LQ9NWQ4 482 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 OXSMQ9NWU1 459 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 FBXL17Q9UF56 701 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms