RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 FAPQ12884 760 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 GLDNQ6ZMI3 551 aaPredicted RBP22.56■■□□□ 1.2
COL13A1-214ENST00000522165 CHMP1BQ7LBR1 199 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 SEMA6DQ8NFY4 1073 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 NPRL2Q8WTW4 380 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 GINS4Q9BRT9 223 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 NICN1Q9BSH3 213 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 ZNF587BE7ETH6 402 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 SSNA1O43805 119 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 MPIG6BO95866 241 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 CHRM2P08172 466 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 ACKR3P25106 362 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 FJX1Q86VR8 437 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 PNLDC1Q8NA58 520 aaKnown RBP22.56■■□□□ 1.2
COL13A1-214ENST00000522165 MED30Q96HR3 178 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 ZNF222Q9UK12 451 aa22.56■■□□□ 1.2
COL13A1-214ENST00000522165 A0A0A6YYD4 124 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 TRGV5A0A0B4J1U4 118 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 PYCARD-AS1I3L0S3 204 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 CYB5AP00167 134 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 ANXA7P20073 488 aaKnown RBP22.55■■□□□ 1.2
COL13A1-214ENST00000522165 PTGFRP43088 359 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 ALDH3B1P43353 468 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 PABPC1L2AQ5JQF8 200 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 FDCSPQ8NFU4 85 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 APH1AQ96BI3 265 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 WDYHV1Q96HA8 205 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 SELENOIQ9C0D9 397 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 SPRR3Q9UBC9 169 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 BOLA1Q9Y3E2 137 aa22.55■■□□□ 1.2
COL13A1-214ENST00000522165 RAB3DO95716 219 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 IL5P05113 134 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 CPN1P15169 458 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 CDK10Q15131 360 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 SEC22CQ9BRL7 303 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 TMEM59Q9BXS4 323 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 BANF2Q9H503 90 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 ATP6V1G1O75348 118 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 CD74P04233 296 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 NAT2P11245 290 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 ANXA3P12429 323 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 GNB3P16520 340 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 NBL1P41271 181 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 C9orf135Q5VTT2 229 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 MCEMP1Q8IX19 187 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 NPDC1Q9NQX5 325 aaPredicted RBP22.54■■□□□ 1.2
COL13A1-214ENST00000522165 PLSCR3Q9NRY6 295 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 GHRLQ9UBU3 117 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 ZNF391Q9UJN7 358 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 FREM1Q5H8C1 2179 aa22.54■■□□□ 1.2
COL13A1-214ENST00000522165 CNOT1A5YKK6 2376 aaKnown RBP22.54■■□□□ 1.2
COL13A1-214ENST00000522165 ZNF736B4DX44 427 aaPredicted RBP22.53■■□□□ 1.2
COL13A1-214ENST00000522165 FABP7O15540 132 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 FCGR2AP12318 317 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 FOXG1P55316 489 aaPredicted RBP22.53■■□□□ 1.2
COL13A1-214ENST00000522165 RIPPLY1Q0D2K3 151 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 C1QL2Q7Z5L3 287 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 TRAPPC6BQ86SZ2 158 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 ZNF584Q8IVC4 421 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 CPEB3Q8NE35 698 aaKnown RBP22.53■■□□□ 1.2
COL13A1-214ENST00000522165 OR5D18Q8NGL1 313 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 A0A1W2PP11 408 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 TNK1Q13470 666 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 SF3B4Q15427 424 aaKnown RBP eCLIP22.53■■□□□ 1.2
COL13A1-214ENST00000522165 SLC22A6Q4U2R8 563 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 NCCRP1Q6ZVX7 275 aaPredicted RBP22.53■■□□□ 1.2
COL13A1-214ENST00000522165 NUFIP2Q7Z417 695 aaKnown RBP22.53■■□□□ 1.2
COL13A1-214ENST00000522165 TINAGL1Q9GZM7 467 aaPredicted RBP22.53■■□□□ 1.2
COL13A1-214ENST00000522165 RGCCQ9H4X1 137 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 UPB1Q9UBR1 384 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 ATPIF1Q9UII2 106 aa22.53■■□□□ 1.2
COL13A1-214ENST00000522165 ZNF292O60281 2723 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 MEIKINA0A087WXM9 373 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 FAM172BPA6NC97 362 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 M0QYG6 137 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 CRTAPO75718 401 aaPredicted RBP22.52■■□□□ 1.2
COL13A1-214ENST00000522165 CEACAM1P13688 526 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 FAM189A2Q15884 450 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 IGFL2Q6UWQ7 119 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 SEZ6L2Q6UXD5 910 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 ZFAND1Q8TCF1 268 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 NUDCD2Q8WVJ2 157 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 PIGTQ969N2 578 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 GPR173Q9NS66 373 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 B3GNT2Q9NY97 397 aa22.52■■□□□ 1.2
COL13A1-214ENST00000522165 A0A096LPE4 126 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 A0A1W2PPZ6 126 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 RGS13O14921 159 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 ZP1P60852 638 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 PMP22Q01453 160 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 SLC36A1Q7Z2H8 476 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 RTN4RL2Q86UN3 420 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 CST11Q9H112 138 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 GPN1Q9HCN4 374 aaPredicted RBP22.51■■□□□ 1.19
COL13A1-214ENST00000522165 ING4Q9UNL4 249 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 DMXL1Q9Y485 3027 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 SOCS1O15524 211 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 VSIG10L2P0DP72 767 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 ZNF100Q8IYN0 542 aa22.51■■□□□ 1.19
COL13A1-214ENST00000522165 TNFAIP8L1Q8WVP5 186 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms