RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 ENPP5Q9UJA9 477 aa12.75□□□□□ -0.37
NUP54-213ENST00000513352 ZDHHC8Q9ULC8 765 aa12.75□□□□□ -0.37
NUP54-213ENST00000513352 V9GYS6 101 aa12.75□□□□□ -0.37
NUP54-213ENST00000513352 ZNF850A8MQ14 1090 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 H0YL77 283 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 LMX1BO60663 402 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 NDUFS7O75251 213 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 ISG15P05161 165 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 CCL1P22362 96 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 PSMB9P28065 219 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 PTH2RP49190 550 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 TNFAIP6P98066 277 aaPredicted RBP12.74□□□□□ -0.37
NUP54-213ENST00000513352 BDH1Q02338 343 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 PRDX4Q13162 271 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 DEFB113Q30KQ7 82 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 DMKNQ6E0U4 476 aaPredicted RBP12.74□□□□□ -0.37
NUP54-213ENST00000513352 CCDC54Q8NEL0 328 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 OR51A4Q8NGJ6 313 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 OR14K1Q8NGZ2 314 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 IGFBPL1Q8WX77 278 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 FCGR1BQ92637 280 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 GHSRQ92847 366 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 NINJ1Q92982 152 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 NR1H4Q96RI1 486 aaPredicted RBP12.74□□□□□ -0.37
NUP54-213ENST00000513352 DIRC2Q96SL1 478 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 SLC22A4Q9H015 551 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 ZNF696Q9H7X3 374 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 DHDHQ9UQ10 334 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 ZNF281Q9Y2X9 895 aa12.74□□□□□ -0.37
NUP54-213ENST00000513352 A0A087WXM4 84 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 IGHV3-64DA0A0J9YX35 117 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 ANXA2P2A6NMY6 339 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 F5H5P2 479 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 RPSAP08865 295 aaKnown RBP12.73□□□□□ -0.37
NUP54-213ENST00000513352 SOX2P48431 317 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 ACSM1Q08AH1 577 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 NEDD8Q15843 81 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 CARTPTQ16568 116 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 LIPKQ5VXJ0 399 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 PLCXD3Q63HM9 321 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 KCTD8Q6ZWB6 473 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 MOB3CQ70IA8 216 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 ZDHHC23Q8IYP9 409 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 OR13C5Q8NGS8 318 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 RPS4Y2Q8TD47 263 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 GPR148Q8TDV2 347 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 ITLN1Q8WWA0 313 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 NEU4Q8WWR8 484 aaPredicted RBP12.73□□□□□ -0.37
NUP54-213ENST00000513352 FGGYQ96C11 551 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 HIST1H2AAQ96QV6 131 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 MGLLQ99685 303 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 TMED9Q9BVK6 235 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 EGLN1Q9GZT9 426 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 PPP1R3EQ9H7J1 279 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 SAP30LQ9HAJ7 183 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 VCX3AQ9NNX9 186 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 GPR173Q9NS66 373 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 NKIRAS2Q9NYR9 191 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 ITPR2Q14571 2701 aa12.73□□□□□ -0.37
NUP54-213ENST00000513352 NAV2Q8IVL1 2488 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 MLNRO43193 412 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 GMDSO60547 372 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 NCR1O76036 304 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 LY6HO94772 140 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 CST4P01036 141 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 NRASP01111 189 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 OCM2P0CE71 109 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 OCMP0CE72 109 aaPredicted RBP12.72□□□□□ -0.37
NUP54-213ENST00000513352 SRP9P49458 86 aaKnown RBP12.72□□□□□ -0.37
NUP54-213ENST00000513352 MLLT11Q13015 90 aaPredicted RBP12.72□□□□□ -0.37
NUP54-213ENST00000513352 ARMCX4Q5H9R4 360 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 DMRTC1Q5HYR2 192 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 CEP78Q5JTW2 689 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 FAM209AQ5JX71 171 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 CLVS2Q5SYC1 327 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 ZBTB37Q5TC79 503 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 NPRL2Q8WTW4 380 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 RGP1Q92546 391 aaPredicted RBP12.72□□□□□ -0.37
NUP54-213ENST00000513352 ITFG2Q969R8 447 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 MBD6Q96DN6 1003 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 OPALINQ96PE5 141 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 OR2V2Q96R30 315 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 MICU1Q9BPX6 476 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 GSX2Q9BZM3 304 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 CXXC4Q9H2H0 198 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 BARX1Q9HBU1 254 aaPredicted RBP12.72□□□□□ -0.37
NUP54-213ENST00000513352 ABCB9Q9NP78 766 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 ISYNA1Q9NPH2 558 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 ZNF701Q9NV72 531 aaPredicted RBP12.72□□□□□ -0.37
NUP54-213ENST00000513352 ITGB1BP2Q9UKP3 347 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 MPC1Q9Y5U8 109 aa12.72□□□□□ -0.37
NUP54-213ENST00000513352 CHD3Q12873 2000 aaKnown RBP12.72□□□□□ -0.37
NUP54-213ENST00000513352 TRIM64A6NGJ6 449 aa12.71□□□□□ -0.37
NUP54-213ENST00000513352 DHRS7CA6NNS2 312 aa12.71□□□□□ -0.37
NUP54-213ENST00000513352 PLPP2O43688 288 aa12.71□□□□□ -0.37
NUP54-213ENST00000513352 SSX4O60224 188 aa12.71□□□□□ -0.37
NUP54-213ENST00000513352 IGHV4-39P01824 125 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms