RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 ZNF780BQ9Y6R6 833 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 TNS1Q9HBL0 1735 aaKnown RBP6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 RAB27BO00194 218 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 SOCS1O15524 211 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 SNAPC5O75971 98 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 WISP1O95388 367 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 IL33O95760 270 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 ONECUT2O95948 504 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 GALTP07902 379 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 CTHP32929 405 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 GPR1P46091 355 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC37A1P57057 533 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 CDK3Q00526 305 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 CDC42EP1Q00587 391 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 ZP2Q05996 745 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 PDGFRLQ15198 375 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 MMDQ15546 238 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 MPV17LQ2QL34 196 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 COL13A1Q5TAT6 717 aaPredicted RBP6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 C1QL3Q5VWW1 255 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 PRSS41Q7RTY9 318 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC35E3Q7Z769 313 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 OR2L3Q8NG85 312 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 TOMM40LQ969M1 308 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 IGSF21Q96ID5 467 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 VN1R1Q9GZP7 353 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 PARP11Q9NR21 331 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 CENPMQ9NSP4 180 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 PPP1R14DQ9NXH3 145 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 LAMP3Q9UQV4 416 aa6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 MRPS18CQ9Y3D5 142 aaKnown RBP6.46□□□□□ -1.38
LIMCH1-207ENST00000508466 PLXNB2O15031 1838 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 ASPMQ8IZT6 3477 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF318Q5VUA4 2279 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 IGKV1-8A0A0C4DH67 115 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM269A0A1B0GVZ9 245 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 HRKO00198 91 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 P2RY10O00398 339 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 CST7O76096 145 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 RPLP1P05386 114 aaKnown RBP6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 CSRP1P21291 193 aaKnown RBP6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 DNASE1L1P49184 302 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 IDH3GP51553 393 aaPredicted RBP6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 FKBP1BP68106 108 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 PCK2Q16822 640 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 THEM4Q5T1C6 240 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC8B1Q6J4K2 584 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 C22orf39Q6P5X5 142 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 C16orf54Q6UWD8 224 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 ANKRD33Q7Z3H0 272 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF100Q8IYN0 542 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM256Q8N2U0 113 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 DCAF4L2Q8NA75 395 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 OR52N4Q8NGI2 321 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 ASB13Q8WXK3 278 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 UBE2E3Q969T4 207 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF689Q96CS4 500 aaPredicted RBP6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 ALKBH3Q96Q83 286 aaPredicted RBP6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 URM1Q9BTM9 101 aaKnown RBP6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 CABLES2Q9BTV7 478 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 TEX101Q9BY14 249 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 SPHK2Q9NRA0 654 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 DHDHQ9UQ10 334 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 FUT9Q9Y231 359 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 CCL26Q9Y258 94 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 EMC9Q9Y3B6 208 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 CCDC187A0A096LP49 1063 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A1W2PNV4 684 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 GPRIN2O60269 458 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 MPIG6BO95866 241 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 CST4P01036 141 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 CST2P09228 141 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 FGF5P12034 268 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 TIMP2P16035 220 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 HIST1H1TP22492 207 aaPredicted RBP6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 RAB28P51157 221 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 PTTG1IPP53801 180 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 RBX1P62877 108 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC35A1P78382 337 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 GLO1Q04760 184 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM176BQ3YBM2 270 aaPredicted RBP6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 LINC01590Q5TEZ4 76 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM225Q6GV28 225 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 NPSR1Q6W5P4 371 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 SYS1Q8N2H4 156 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 PLPP5Q8NEB5 264 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 FBXO22Q8NEZ5 403 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 FGGYQ96C11 551 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 YPEL4Q96NS1 127 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 OR5B2Q96R09 309 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 PRRT1Q99946 306 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 NUDT9Q9BW91 350 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC26A1Q9H2B4 701 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 CNTD2Q9H8S5 307 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 GNG13Q9P2W3 67 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 FLVCR1Q9Y5Y0 555 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 ETV7Q9Y603 341 aa6.45□□□□□ -1.38
LIMCH1-207ENST00000508466 RBFOX3A6NFN3 312 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 HSD17B6O14756 317 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 CCL25O15444 150 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms