RNA–Protein interactions for RNA: ENST00000496749.1

NIN-215, Transcript of ninein, human

TSL 4

Gene NIN, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIN-215	ENST00000496749	FSHB	P01225	129 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	MUC1	P15941	1255 aa	Predicted RBP	11.6	□□□□□ -0.55
NIN-215	ENST00000496749	CD80	P33681	288 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	BPIFB3	P59826	476 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	PSMA6	P60900	246 aa	Known RBP	11.6	□□□□□ -0.55
NIN-215	ENST00000496749	BAMBI	Q13145	260 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	C11orf91	Q3C1V1	193 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.6	□□□□□ -0.55
NIN-215	ENST00000496749	TMEM236	Q5W0B7	351 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	DEGS2	Q6QHC5	323 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	SLC36A1	Q7Z2H8	476 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	THAP5	Q7Z6K1	395 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	SLC25A28	Q96A46	364 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	DNAJB11	Q9UBS4	358 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	IKZF2	Q9UKS7	526 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	AP4S1	Q9Y587	144 aa		11.6	□□□□□ -0.55
NIN-215	ENST00000496749	ARHGAP32	A7KAX9	2087 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	DOCK11	Q5JSL3	2073 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	SLC22A31	A6NKX4	558 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	TMPRSS2	O15393	492 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	ZNF254	O75437	659 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	RBMX	P38159	391 aa	Known RBP	11.59	□□□□□ -0.55
NIN-215	ENST00000496749	PSMB10	P40306	273 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	MAP2K3	P46734	347 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	RIDA	P52758	137 aa	Known RBP	11.59	□□□□□ -0.55
NIN-215	ENST00000496749	PTGES3	Q15185	160 aa	Known RBP	11.59	□□□□□ -0.55
NIN-215	ENST00000496749	ATP6AP1	Q15904	470 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	METTL11B	Q5VVY1	283 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	FAHD1	Q6P587	224 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	GALNT4	Q8N4A0	578 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	SIGLECL1	Q8N7X8	197 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	C19orf18	Q8NEA5	215 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	LRRC29	Q8WV35	223 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	UPRT	Q96BW1	309 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	CNN2	Q99439	309 aa	Known RBP	11.59	□□□□□ -0.55
NIN-215	ENST00000496749	MNT	Q99583	582 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	TEAD3	Q99594	435 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	LRP12	Q9Y561	859 aa		11.59	□□□□□ -0.55
NIN-215	ENST00000496749	TRAV40	A0A0B4J280	105 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	TMEM269	A0A1B0GVZ9	245 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	NKX6-3	A6NJ46	265 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	MTRF1	O75570	445 aa	Known RBP	11.58	□□□□□ -0.56
NIN-215	ENST00000496749	GYPA	P02724	150 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	MRPL3	P09001	348 aa	Known RBP	11.58	□□□□□ -0.56
NIN-215	ENST00000496749	ATP6V1B1	P15313	513 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	ALOX5AP	P20292	161 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	UBA52	P62987	128 aa	Known RBP	11.58	□□□□□ -0.56
NIN-215	ENST00000496749	PRDX4	Q13162	271 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	LYPD2	Q6UXB3	125 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	ZNF826P	Q6ZT77	177 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	DOK3	Q7L591	496 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	GID4	Q8IVV7	300 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	ZDHHC23	Q8IYP9	409 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	BBS1	Q8NFJ9	593 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	OR1M1	Q8NGA1	313 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	PIGC	Q92535	297 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	ZDHHC16	Q969W1	377 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	C12orf43	Q96C57	262 aa	Known RBP	11.58	□□□□□ -0.56
NIN-215	ENST00000496749	AMELY	Q99218	206 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	ZNF69	Q9UC07	566 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	GTF2A1L	Q9UNN4	478 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	RHBDD3	Q9Y3P4	386 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	ORC6	Q9Y5N6	252 aa		11.58	□□□□□ -0.56
NIN-215	ENST00000496749	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	C5orf63	A6NC05	138 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	ZNF850	A8MQ14	1090 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	P2RY10	O00398	339 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	GPR37	O15354	613 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	NDUFB3	O43676	98 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	TOX4	O94842	621 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	CST4	P01036	141 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	SLC2A5	P22732	501 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	PRTN3	P24158	256 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	DCTD	P32321	178 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	ATP6V1E1	P36543	226 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	DAP	P51397	102 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	FGF12	P61328	243 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	FOXL1	Q12952	345 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	LRRC10	Q5BKY1	277 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	MEPCE	Q7L2J0	689 aa	Known RBP	11.57	□□□□□ -0.56
NIN-215	ENST00000496749	PRSS45	Q7RTY3	260 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	ZNF679	Q8IYX0	411 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	CMTM4	Q8IZR5	234 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	GCSAM	Q8N6F7	178 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	OR8B12	Q8NGG6	310 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	ST8SIA4	Q92187	359 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	UTP4	Q969X6	686 aa	Known RBP	11.57	□□□□□ -0.56
NIN-215	ENST00000496749	RNF170	Q96K19	258 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	PKP2	Q99959	881 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	PCGF1	Q9BSM1	259 aa		11.57	□□□□□ -0.56
NIN-215	ENST00000496749	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.57	□□□□□ -0.56
NIN-215	ENST00000496749	IGHV3OR16-10	A0A075B7F0	116 aa		11.56	□□□□□ -0.56
NIN-215	ENST00000496749		A0A0U1RQV5	110 aa		11.56	□□□□□ -0.56
NIN-215	ENST00000496749	TMEM89	A2RUT3	159 aa		11.56	□□□□□ -0.56
NIN-215	ENST00000496749	ZNF879	B4DU55	563 aa		11.56	□□□□□ -0.56
NIN-215	ENST00000496749	ZNF670-ZNF695	F2Z2N8	137 aa		11.56	□□□□□ -0.56
NIN-215	ENST00000496749	CDIPT	O14735	213 aa		11.56	□□□□□ -0.56
NIN-215	ENST00000496749	PAX2	Q02962	417 aa		11.56	□□□□□ -0.56
NIN-215	ENST00000496749	RIPPLY1	Q0D2K3	151 aa		11.56	□□□□□ -0.56
NIN-215	ENST00000496749	PDCD1	Q15116	288 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms