RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ZNF529Q6P280 563 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 CLEC18BQ6UXF7 455 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 CCBE1Q6UXH8 406 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-214ENST00000495485 KRT74Q7RTS7 529 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 PRSS45Q7RTY3 260 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 OR2W3Q7Z3T1 314 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 NUFIP2Q7Z417 695 aaKnown RBP8.94□□□□□ -0.98
HDAC3-214ENST00000495485 CDH24Q86UP0 819 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 CLEC18CQ8NCF0 446 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 DNAAF1Q8NEP3 725 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 OR1K1Q8NGR3 316 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 OR13C9Q8NGT0 318 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 OR14K1Q8NGZ2 314 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 AKR7LQ8NHP1 331 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 KCNG3Q8TAE7 436 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 PRR7Q8TB68 274 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 SMIM4Q8WVI0 70 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 FAM46BQ96A09 425 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 APOBEC3DQ96AK3 386 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-214ENST00000495485 SPSB1Q96BD6 273 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 ADAT3Q96EY9 351 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-214ENST00000495485 REEP6Q96HR9 211 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 ATG5Q9H1Y0 275 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 C12orf49Q9H741 205 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 RBFOX1Q9NWB1 397 aaKnown RBP8.94□□□□□ -0.98
HDAC3-214ENST00000495485 TBC1D24Q9ULP9 559 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 OSGIN2Q9Y236 505 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 PIGLQ9Y2B2 252 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 PKDREJQ9NTG1 2253 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 ASH1LQ9NR48 2969 aaKnown RBP8.93□□□□□ -0.98
HDAC3-214ENST00000495485 A0A0B4J203 849 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 CIB4A0PJX0 185 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 EEF1E1O43324 174 aaKnown RBP8.93□□□□□ -0.98
HDAC3-214ENST00000495485 RBBP9O75884 186 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 IL2RAP01589 272 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 IGHV3-9P01782 118 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 CHRM2P08172 466 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 CDK2P24941 298 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 RAB1AP62820 205 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 GPR176Q14439 515 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 GSG1Q2KHT4 349 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 KRTAP27-1Q3LI81 207 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 AWAT2Q6E213 333 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 Q6ZT83 130 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 GDPD3Q7L5L3 318 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 CD163Q86VB7 1156 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 DOLPP1Q86YN1 238 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 DUSP18Q8NEJ0 188 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 C1orf162Q8NEQ5 155 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-214ENST00000495485 ITPKCQ96DU7 683 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 SLC25A38Q96DW6 304 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 ABHD1Q96SE0 405 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 NUDT16L1Q9BRJ7 211 aaKnown RBP8.93□□□□□ -0.98
HDAC3-214ENST00000495485 URM1Q9BTM9 101 aaKnown RBP8.93□□□□□ -0.98
HDAC3-214ENST00000495485 C1QTNF5Q9BXJ0 243 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 CHST5Q9GZS9 411 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 CST11Q9H112 138 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 DPAGT1Q9H3H5 408 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 NPAP1Q9NZP6 1156 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 FBLN5Q9UBX5 448 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 SLC7A11Q9UPY5 501 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 MEMO1Q9Y316 297 aa8.93□□□□□ -0.98
HDAC3-214ENST00000495485 TMEM272A0A1B0GTI8 110 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 LINC00854A0A1B0GVQ3 168 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 WIPF3A6NGB9 483 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 GGT3PA6NGU5 568 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 CCL21O00585 134 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 ORC5O43913 435 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 CTAG2O75638 210 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 CSF1P09603 554 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 PRF1P14222 555 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 STOMP27105 288 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 PRSS3P35030 304 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 TAS2R20P59543 309 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 ACTBP60709 375 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 ACTG1P63261 375 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 SNTB2Q13425 540 aaKnown RBP8.92□□□□□ -0.98
HDAC3-214ENST00000495485 TBC1D28Q2M2D7 210 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 RSPO1Q2MKA7 263 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-214ENST00000495485 CLVS2Q5SYC1 327 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 C1orf185Q5T7R7 199 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 RTL6Q6ICC9 239 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF585AQ6P3V2 769 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 BEND4Q6ZU67 534 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 LHFPL2Q6ZUX7 228 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 NRARPQ7Z6K4 114 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF554Q86TJ5 538 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 ANGPTL5Q86XS5 388 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF101Q8IZC7 436 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF808Q8N4W9 903 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-214ENST00000495485 CNEP1R1Q8N9A8 125 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 CSNK2A3Q8NEV1 391 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 OR52N4Q8NGI2 321 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 BCL2L2Q92843 193 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-214ENST00000495485 SLC25A28Q96A46 364 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 SGK3Q96BR1 496 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 DMRTA2Q96SC8 542 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 ACTR6Q9GZN1 396 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 C11orf54Q9H0W9 315 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-214ENST00000495485 CNTD2Q9H8S5 307 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms