RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	SGK3	Q96BR1	496 aa		11.17	□□□□□ -0.62
SAMM50-204	ENST00000493161	SLAMF6	Q96DU3	332 aa		11.17	□□□□□ -0.62
SAMM50-204	ENST00000493161	KCNJ15	Q99712	375 aa		11.17	□□□□□ -0.62
SAMM50-204	ENST00000493161	SSX3	Q99909	188 aa		11.17	□□□□□ -0.62
SAMM50-204	ENST00000493161	EGLN3	Q9H6Z9	239 aa		11.17	□□□□□ -0.62
SAMM50-204	ENST00000493161	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.17	□□□□□ -0.62
SAMM50-204	ENST00000493161	CENPM	Q9NSP4	180 aa		11.17	□□□□□ -0.62
SAMM50-204	ENST00000493161	MRGBP	Q9NV56	204 aa		11.17	□□□□□ -0.62
SAMM50-204	ENST00000493161	COMMD3-BMI1	R4GMX3	469 aa		11.17	□□□□□ -0.62
SAMM50-204	ENST00000493161	ANKRD30BL	A7E2S9	258 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	SPARC	P09486	303 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	GRK5	P34947	590 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	KIR2DS4	P43632	304 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	GSS	P48637	474 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	UBE2E1	P51965	193 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	MZT1	Q08AG7	82 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	DGUOK	Q16854	277 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	KLHL12	Q53G59	568 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	GLYAT	Q6IB77	296 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	CRIP3	Q6Q6R5	217 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	ZDHHC21	Q8IVQ6	265 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	ZNF511	Q8NB15	262 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	BEND2	Q8NDZ0	799 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	OR9Q1	Q8NGQ5	310 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	GAFA1	Q96PS6	74 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	HOPX	Q9BPY8	73 aa	Predicted RBP	11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	ELL3	Q9HB65	397 aa	Predicted RBP	11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	DCAF13	Q9NV06	445 aa	Known RBP	11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	HAO2	Q9NYQ3	351 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	ZNF319	Q9P2F9	582 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	ZNF391	Q9UJN7	358 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	RHBDD3	Q9Y3P4	386 aa		11.16	□□□□□ -0.62
SAMM50-204	ENST00000493161	XRCC2	O43543	280 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	IDH3B	O43837	385 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	CHST1	O43916	411 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	GADD45G	O95257	159 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	SEMG1	P04279	462 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	GYPB	P06028	91 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	VSIG10L2	P0DP72	767 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	LOXL3	P58215	753 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	SPIB	Q01892	262 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	KRT72	Q14CN4	511 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	TAF13	Q15543	124 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	LRRC10	Q5BKY1	277 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	REC114	Q7Z4M0	266 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	RPL3L	Q92901	407 aa	Known RBP	11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	C12orf43	Q96C57	262 aa	Known RBP	11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	DUS3L	Q96G46	650 aa	Known RBP	11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	REEP6	Q96HR9	211 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	DMRTB1	Q96MA1	342 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	FGF23	Q9GZV9	251 aa	Predicted RBP	11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	TLNRD1	Q9H1K6	362 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	MAB21L2	Q9Y586	359 aa		11.15	□□□□□ -0.62
SAMM50-204	ENST00000493161	hCG_38984	A0A1B0GV85	526 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	ZNF593	O00488	134 aa	Predicted RBP	11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	SLC22A2	O15244	555 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	CLU	P10909	449 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	DDOST	P39656	456 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	NAA10	P41227	235 aa	Predicted RBP	11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	CX3CR1	P49238	355 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	NUDT2	P50583	147 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	MXRA7	P84157	204 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	ACSM1	Q08AH1	577 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	HABP2	Q14520	560 aa	Predicted RBP	11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	GFOD2	Q3B7J2	385 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	NSUN5P1	Q3KNT7	163 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	ZNF788	Q6ZQV5	615 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	PRSS45	Q7RTY3	260 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	RNF148	Q8N7C7	305 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	SLC37A3	Q8NCC5	494 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	OR4C13	Q8NGP0	309 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	OR2T4	Q8NH00	348 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	MMP28	Q9H239	520 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	OPA3	Q9H6K4	179 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	METTL8	Q9H825	291 aa	Known RBP	11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	ABCD2	Q9UBJ2	740 aa		11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.14	□□□□□ -0.63
SAMM50-204	ENST00000493161		A0A1W2PQ09	198 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	DHRS12	A0PJE2	317 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161		M0R1W7	72 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	AKR7A2	O43488	359 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	ANXA2	P07355	339 aa	Known RBP	11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	CD28	P10747	220 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	NDUFB7	P17568	137 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	GSK3A	P49840	483 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	ENTPD1	P49961	510 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	PSME3	P61289	254 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	TSPAN31	Q12999	210 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	TIGD6	Q17RP2	521 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	NCR3LG1	Q68D85	454 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	PGBD2	Q6P3X8	592 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	FAM57B	Q71RH2	274 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	OR51G2	Q8NGK0	314 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	OR4C15	Q8NGM1	316 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	OR8D4	Q8NGM9	314 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	OR2T6	Q8NHC8	308 aa		11.13	□□□□□ -0.63
SAMM50-204	ENST00000493161	ANGPTL6	Q8NI99	470 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms