RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 A8MXK9 166 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 F5H0A9 414 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 PSMD9O00233 223 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 EBAG9O00559 213 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 TMPRSS2O15393 492 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 PRKYO43930 277 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 MITFO75030 526 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 MTRF1O75570 445 aaKnown RBP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 FSTL3O95633 263 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 KRT8P05787 483 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 WNT2P09544 360 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 ZNF12P17014 697 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 MTNR1AP48039 350 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 GMFBP60983 142 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 FAM201AQ5SY85 155 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 NXNL2Q5VZ03 156 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 ZFP1Q6P2D0 407 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 DEGS2Q6QHC5 323 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 ZNF322Q6U7Q0 402 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 C12orf54Q6X4T0 127 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 USP43Q70EL4 1123 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 SLC35F2Q8IXU6 374 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 ZNF679Q8IYX0 411 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 PNLDC1Q8NA58 520 aaKnown RBP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 TMEM163Q8TC26 289 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 LRRC29Q8WV35 223 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 ZFAND2BQ8WV99 257 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 RAB40AQ8WXH6 277 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 GCDHQ92947 438 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 RFKQ969G6 155 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 RNF170Q96K19 258 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 FAM71F1Q96KD3 344 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 MNTQ99583 582 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 RBM4BQ9BQ04 359 aaKnown RBP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 NUDT16L1Q9BRJ7 211 aaKnown RBP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 ADI1Q9BV57 179 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 OSBPL10Q9BXB5 764 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 TTTY10Q9BZA0 68 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 GABARAPL1Q9H0R8 117 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 MOB1AQ9H8S9 216 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 MMP26Q9NRE1 261 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 NUP50Q9UKX7 468 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.64□□□□□ -1.19
HDAC6-232ENST00000489053 OAZ3Q9UMX2 235 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 RHBDD3Q9Y3P4 386 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 NBEAL1Q6ZS30 2694 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 ZNF816-ZNF321PA0A0X1KG74 233 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 C5orf63A6NC05 138 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 TMEM210A6NLX4 147 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 SNTNA6NMZ2 147 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 LOC110117498-PIK3R3F6TDL0 507 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 TRAPPC2LH3BP13 241 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 CDIPTO14735 213 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 GYPAP02724 150 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 ATP6V1B1P15313 513 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 ALOX5APP20292 161 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 SLC2A5P22732 501 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 RBMXP38159 391 aaKnown RBP7.63□□□□□ -1.19
HDAC6-232ENST00000489053 PMELP40967 661 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 HCCSP53701 268 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 HILS1P60008 231 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 CXCR4P61073 352 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 RIPPLY1Q0D2K3 151 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 POU4F2Q12837 409 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 PRDX4Q13162 271 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 GPR157Q5UAW9 335 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 METTL11BQ5VVY1 283 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 SLX4IPQ5VYV7 408 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 PLCXD3Q63HM9 321 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 WDR25Q64LD2 544 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-232ENST00000489053 KDM4DQ6B0I6 523 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 ZNF826PQ6ZT77 177 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 SLC36A1Q7Z2H8 476 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 FAM220AQ7Z4H9 259 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 GALNT4Q8N4A0 578 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 YIPF7Q8N8F6 280 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 SEMA6DQ8NFY4 1073 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 OR1M1Q8NGA1 313 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 OR8B12Q8NGG6 310 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 OR51G2Q8NGK0 314 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 PYDC1Q8WXC3 89 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 ST8SIA4Q92187 359 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 ZDHHC16Q969W1 377 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 RAB3IPQ96QF0 476 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-232ENST00000489053 CIB1Q99828 191 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 PKP2Q99959 881 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 PCGF1Q9BSM1 259 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 PBOV1Q9GZY1 135 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 RNPEPL1Q9HAU8 725 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 PLEKHA1Q9HB21 404 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 GPR84Q9NQS5 396 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 CLN6Q9NWW5 311 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 WARS2Q9UGM6 360 aaKnown RBP7.63□□□□□ -1.19
HDAC6-232ENST00000489053 ENPP5Q9UJA9 477 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 PIGLQ9Y2B2 252 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 KLHDC2Q9Y2U9 406 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 POLR3KQ9Y2Y1 108 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-232ENST00000489053 ANK2Q01484 3957 aa7.63□□□□□ -1.19
HDAC6-232ENST00000489053 WNK2Q9Y3S1 2297 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 CUBNO60494 3623 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms