RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CAV3P56539 151 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 SLC35A2P78381 396 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 DGCR6Q14129 220 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 DEFB121Q5J5C9 76 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 METTL21CQ5VZV1 264 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 C11orf53Q8IXP5 236 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 Q8N2B8 174 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 SIKE1Q9BRV8 207 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 SERTAD4Q9NUC0 356 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 GID8Q9NWU2 228 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 HAO2Q9NYQ3 351 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 E9PQ18 207 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 H1F0P07305 194 aaKnown RBP13.06□□□□□ -0.32
DDX56-210ENST00000479440 PF4V1P10720 104 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 HIST1H1CP16403 213 aaKnown RBP13.06□□□□□ -0.32
DDX56-210ENST00000479440 NOS3P29474 1203 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 GNALP38405 381 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 HABP2Q14520 560 aaPredicted RBP13.06□□□□□ -0.32
DDX56-210ENST00000479440 MAPRE2Q15555 327 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 HCP5Q6MZN7 132 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 CPLX4Q7Z7G2 160 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 ZDHHC21Q8IVQ6 265 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 CYB561A3Q8NBI2 242 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 WFDC9Q8NEX5 89 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 SEH1LQ96EE3 360 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 DUS3LQ96G46 650 aaKnown RBP13.06□□□□□ -0.32
DDX56-210ENST00000479440 HSH2DQ96JZ2 352 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 GAFA1Q96PS6 74 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 TLNRD1Q9H1K6 362 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 ZNF391Q9UJN7 358 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 AP3M1Q9Y2T2 418 aa13.06□□□□□ -0.32
DDX56-210ENST00000479440 TRBV23-1A0A0A0MS06 115 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 CDIPTO14735 213 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 ARPC3O15145 178 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 SIGLEC5O15389 551 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 DUS4LO95620 317 aaKnown RBP13.05□□□□□ -0.32
DDX56-210ENST00000479440 AMY2BP19961 511 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 ANOS1P23352 680 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 DGUOKQ16854 277 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
DDX56-210ENST00000479440 ZNF788Q6ZQV5 615 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 CBLL1Q75N03 491 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 SDR9C7Q8NEX9 313 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 OR5T2Q8NGG2 359 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 OR10Z1Q8NGY1 313 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 OR4K13Q8NH42 304 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 SPSB4Q96A44 273 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 RAB3IPQ96QF0 476 aaPredicted RBP13.05□□□□□ -0.32
DDX56-210ENST00000479440 MICU1Q9BPX6 476 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 CDCA4Q9BXL8 241 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 FN3KQ9H479 309 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 SNTG1Q9NSN8 517 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 MRPL22Q9NWU5 206 aaKnown RBP13.05□□□□□ -0.32
DDX56-210ENST00000479440 ENPP4Q9Y6X5 453 aa13.05□□□□□ -0.32
DDX56-210ENST00000479440 A0A0G2JND7 137 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 ANXA2P2A6NMY6 339 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 TBX1O43435 398 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 GLCEO94923 617 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 PF4P02776 101 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 ALDOBP05062 364 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 SLC2A1P11166 492 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 GMFBP60983 142 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 IL5RAQ01344 420 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 SPIBQ01892 262 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 DCTN2Q13561 401 aaKnown RBP13.04□□□□□ -0.32
DDX56-210ENST00000479440 TAF13Q15543 124 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 SNCBQ16143 134 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 TIGD6Q17RP2 521 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 AGBL2Q5U5Z8 902 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 CCBE1Q6UXH8 406 aaPredicted RBP13.04□□□□□ -0.32
DDX56-210ENST00000479440 FAM185AQ8N0U4 392 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 FTMTQ8N4E7 242 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 WIPF2Q8TF74 440 aaPredicted RBP13.04□□□□□ -0.32
DDX56-210ENST00000479440 RCC1LQ96I51 464 aaKnown RBP13.04□□□□□ -0.32
DDX56-210ENST00000479440 AJUBAQ96IF1 538 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 KCNJ15Q99712 375 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 B9D2Q9BPU9 175 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 RTL8AQ9BWD3 113 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 PAPOLGQ9BWT3 736 aaKnown RBP13.04□□□□□ -0.32
DDX56-210ENST00000479440 PRSS22Q9GZN4 317 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 OR52D1Q9H346 318 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 PITPNC1Q9UKF7 332 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 FAM32AQ9Y421 112 aaKnown RBP13.04□□□□□ -0.32
DDX56-210ENST00000479440 N6AMT1Q9Y5N5 214 aa13.04□□□□□ -0.32
DDX56-210ENST00000479440 LOC100653049A0A140TA62 436 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 A0A1W2PPH5 198 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 ZNF878C9JN71 531 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 CXCR6O00574 342 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 KRT34O76011 436 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 SERPINA1P01009 418 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 CFL1P23528 166 aaKnown RBP13.03□□□□□ -0.32
DDX56-210ENST00000479440 RPS27P42677 84 aaKnown RBP13.03□□□□□ -0.32
DDX56-210ENST00000479440 PRKXP51817 358 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 LGALS4P56470 323 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 MXRA7P84157 204 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 CNN3Q15417 329 aaKnown RBP13.03□□□□□ -0.32
DDX56-210ENST00000479440 SLC16A9Q7RTY1 509 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 DCXRQ7Z4W1 244 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 ARPINQ7Z6K5 226 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 PROKR2Q8NFJ6 384 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms