RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 GAB2Q9UQC2 676 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 OPN1MWP04001 364 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 OPN1MW2P0DN77 364 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 OPN1MW3P0DN78 364 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 FGF5P12034 268 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 FUT3P21217 361 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 HSF1Q00613 529 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 PRDX1Q06830 199 aaKnown RBP12.29□□□□□ -0.44
HDAC1-206ENST00000476391 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.447e-6■■■■□ 25.8
HDAC1-206ENST00000476391 SLC17A1Q14916 467 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 GPR157Q5UAW9 335 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 RABEPKQ7Z6M1 372 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 LYPD6Q86Y78 171 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 SGPP2Q8IWX5 399 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 ZCCHC10Q8TBK6 192 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 LMLNQ96KR4 655 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 OR8B4Q96RC9 309 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 ELOVL3Q9HB03 270 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 SRA1Q9HD15 236 aaKnown RBP12.29□□□□□ -0.44
HDAC1-206ENST00000476391 LSM7Q9UK45 103 aaKnown RBP12.29□□□□□ -0.44
HDAC1-206ENST00000476391 WSB1Q9Y6I7 421 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 SCN10AQ9Y5Y9 1956 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 IGKV1-8A0A0C4DH67 115 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 GRM6O15303 877 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 GUSBP08236 651 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 BRS3P32247 399 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 BCL6P41182 706 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 RPL29P47914 159 aaKnown RBP12.28□□□□□ -0.44
HDAC1-206ENST00000476391 MAP2K5Q13163 448 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 GPR18Q14330 331 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 PCK2Q16822 640 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 CYB561D1Q8N8Q1 229 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 OR4D6Q8NGJ1 314 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 FNDC9Q8TBE3 224 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 HLA-CQ95604 372 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 SLC22A12Q96S37 553 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 DIRC2Q96SL1 478 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 MACROD1Q9BQ69 325 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 FAAP24Q9BTP7 215 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 PCED1AQ9H1Q7 454 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 SH3BGRL3Q9H299 93 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 SRD5A3Q9H8P0 318 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 WFDC1Q9HC57 220 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 SLC22A13Q9Y226 551 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 RHBDD3Q9Y3P4 386 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 A0A1B0GV50 99 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 SIAH2O43255 324 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 GPR137BO60478 399 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 NSA2O95478 260 aaKnown RBP12.28□□□□□ -0.44
HDAC1-206ENST00000476391 CYB5R3P00387 301 aaPredicted RBP12.28□□□□□ -0.44
HDAC1-206ENST00000476391 STATHP02808 62 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 SLC35G6P0C7Q6 338 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 GNB3P16520 340 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 PI3P19957 117 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 CD82P27701 267 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 CDKN1BP46527 198 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 POLR2HP52434 150 aaKnown RBP12.28□□□□□ -0.44
HDAC1-206ENST00000476391 GXYLT1Q4G148 440 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 GALNTL5Q7Z4T8 443 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 AMZ2Q86W34 360 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 LHFPL1Q86WI0 220 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 CDRT4Q8N9R6 151 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 CPEB3Q8NE35 698 aaKnown RBP12.28□□□□□ -0.44
HDAC1-206ENST00000476391 SVIPQ8NHG7 77 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 OTOSQ8NHW6 89 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 C19orf53Q9UNZ5 99 aaPredicted RBP12.28□□□□□ -0.44
HDAC1-206ENST00000476391 LSM5Q9Y4Y9 91 aaKnown RBP12.28□□□□□ -0.44
HDAC1-206ENST00000476391 COLEC10Q9Y6Z7 277 aa12.28□□□□□ -0.44
HDAC1-206ENST00000476391 CTSVO60911 334 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 MMP7P09237 267 aaPredicted RBP12.27□□□□□ -0.44
HDAC1-206ENST00000476391 FLT3LGP49771 235 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 CEBPGP53567 150 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 ZNF117Q03924 483 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 SPOCK1Q08629 439 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 ZNF506Q5JVG8 444 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 RIPPLY2Q5TAB7 128 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 SPSB3Q6PJ21 355 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 BTNL3Q6UXE8 466 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 TMEM182Q6ZP80 229 aaPredicted RBP12.27□□□□□ -0.44
HDAC1-206ENST00000476391 OR10G4Q8NGN3 311 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 SRPK3Q9UPE1 567 aa12.27□□□□□ -0.44
HDAC1-206ENST00000476391 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.27□□□□□ -0.45
HDAC1-206ENST00000476391 XKRY2A2RUG3 117 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 XKRYO14609 159 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.45
HDAC1-206ENST00000476391 RBMXP38159 391 aaKnown RBP12.27□□□□□ -0.45
HDAC1-206ENST00000476391 DNASE1L1P49184 302 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 CCL20P78556 96 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 ICAM4Q14773 271 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 MEP1BQ16820 701 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 SLC24A5Q71RS6 500 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 FAM185AQ8N0U4 392 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 EMG1Q92979 244 aaKnown RBP12.27□□□□□ -0.45
HDAC1-206ENST00000476391 RELTQ969Z4 430 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 FGGYQ96C11 551 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 HIST1H2AAQ96QV6 131 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 AMELYQ99218 206 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 CABLES2Q9BTV7 478 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 CHST11Q9NPF2 352 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 GPR173Q9NS66 373 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms