RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-204	ENST00000474025	SERTAD4	Q9NUC0	356 aa		4.17	□□□□□ -1.74
SNRNP40-204	ENST00000474025	ADA2	Q9NZK5	511 aa		4.17	□□□□□ -1.74
SNRNP40-204	ENST00000474025	CYB5R1	Q9UHQ9	305 aa		4.17	□□□□□ -1.74
SNRNP40-204	ENST00000474025	AURKC	Q9UQB9	309 aa		4.17	□□□□□ -1.74
SNRNP40-204	ENST00000474025	SIGLEC7	Q9Y286	467 aa		4.17	□□□□□ -1.74
SNRNP40-204	ENST00000474025	FRAS1	Q86XX4	4008 aa		4.17	□□□□□ -1.74
SNRNP40-204	ENST00000474025	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	GGT3P	A6NGU5	568 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025		M0R1W7	72 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	BHLHE40	O14503	412 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	NDUFB3	O43676	98 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	PTP4A3	O75365	173 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	IFNW1	P05000	195 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	IGLL1	P15814	213 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	OTX1	P32242	354 aa	Predicted RBP	4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	KDELR2	P33947	212 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	CENPA	P49450	140 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	BMX	P51813	675 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	TPTE	P56180	551 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	SELENOW	P63302	87 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	CSNK2B	P67870	215 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	COL10A1	Q03692	680 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	IKZF1	Q13422	519 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	CYLC2	Q14093	348 aa	Predicted RBP	4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	HABP2	Q14520	560 aa	Predicted RBP	4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	AANAT	Q16613	207 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	RFX4	Q33E94	735 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	LRRC10	Q5BKY1	277 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	GLYATL3	Q5SZD4	288 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	HCP5	Q6MZN7	132 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	ERICH5	Q6P6B1	374 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	DNM1P34	Q6PK57	102 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	WDR82	Q6UXN9	313 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	DPY19L2P2	Q6ZN68	376 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	ZBTB46	Q86UZ6	589 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	C11orf53	Q8IXP5	236 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	OR6V1	Q8N148	313 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025		Q8N2B8	174 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	PAPD5	Q8NDF8	572 aa	Known RBP	4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	WFDC9	Q8NEX5	89 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	OR51G2	Q8NGK0	314 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	PIFO	Q8TCI5	191 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	LRRC29	Q8WV35	223 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	LZIC	Q8WZA0	190 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	C12orf43	Q96C57	262 aa	Known RBP	4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	RSRC1	Q96IZ7	334 aa	Known RBP	4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	MAP6	Q96JE9	813 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	SH3GL1	Q99961	368 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	NPFFR1	Q9GZQ6	430 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	MEGF9	Q9H1U4	602 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	ANKRD19P	Q9H560	264 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	RNPEPL1	Q9HAU8	725 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	C14orf119	Q9NWQ9	140 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	MRPL22	Q9NWU5	206 aa	Known RBP	4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	RAB21	Q9UL25	225 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	B9D1	Q9UPM9	204 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	TMEM5	Q9Y2B1	443 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	IER3IP1	Q9Y5U9	82 aa		4.16	□□□□□ -1.74
SNRNP40-204	ENST00000474025	ALMS1	Q8TCU4	4167 aa		4.15	□□□□□ -1.74
SNRNP40-204	ENST00000474025		A0A1W2PQ09	198 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	FAM220BP	B1ANY3	271 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	ANGPTL7	O43827	346 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	NPPA	P01160	153 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	IGLV1-40	P01703	118 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	TFF1	P04155	84 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	NHLRC4	P0CG21	123 aa	Predicted RBP	4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	PSKH1	P11801	424 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	HIST1H1C	P16403	213 aa	Known RBP	4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	GRK5	P34947	590 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	OMP	P47874	163 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	RPS6KA3	P51812	740 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	KRTAP10-11	P60412	298 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	MXRA7	P84157	204 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	CD69	Q07108	199 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	MZT1	Q08AG7	82 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	DGUOK	Q16854	277 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	SLC36A3	Q495N2	470 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	COQ5	Q5HYK3	327 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	PGBD2	Q6P3X8	592 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	SMARCD3	Q6STE5	483 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	DRAM2	Q6UX65	266 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	ZNF788	Q6ZQV5	615 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	DPY19L4	Q7Z388	723 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	LNX2	Q8N448	690 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	OR2T12	Q8NG77	320 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	OR1M1	Q8NGA1	313 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	OR5T2	Q8NGG2	359 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	OR5D13	Q8NGL4	314 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	OR2AJ1	Q8NGZ0	328 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	OR8S1	Q8NH09	359 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	ANGPTL6	Q8NI99	470 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	H1FX	Q92522	213 aa	Known RBP	4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	SPTSSA	Q969W0	71 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	SPSB4	Q96A44	273 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	DUS3L	Q96G46	650 aa	Known RBP	4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	GAFA1	Q96PS6	74 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	NMNAT3	Q96T66	252 aa		4.15	□□□□□ -1.75
SNRNP40-204	ENST00000474025	NKX3-1	Q99801	234 aa	Predicted RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms