RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 RIIAD1A6NNX1 92 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 GPR137BO60478 399 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 ZNF3P17036 446 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 ZNF121P58317 390 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-207ENST00000467819 SPATS1Q496A3 300 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 LINC01590Q5TEZ4 76 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 WDR82Q6UXN9 313 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 FAM216BQ8N7L0 139 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 OTULINQ96BN8 352 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 INTS14Q96SY0 518 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 CITED1Q99966 193 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 ABHD6Q9BV23 337 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 PAPOLGQ9BWT3 736 aaKnown RBP17.37■□□□□ 0.37
COL9A3-207ENST00000467819 SP140LQ9H930 580 aa17.37■□□□□ 0.37
COL9A3-207ENST00000467819 SAMHD1Q9Y3Z3 626 aaKnown RBP17.37■□□□□ 0.37
COL9A3-207ENST00000467819 TCRBV5S2A0A599 114 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 FAM183AA6NL82 134 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 MUC1P15941 1255 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-207ENST00000467819 GNALP38405 381 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 GSK3AP49840 483 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 BLVRAP53004 296 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 KRTAP10-3P60369 221 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 GMFBP60983 142 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 PRB3Q04118 309 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-207ENST00000467819 MICAQ29983 383 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 CDONQ4KMG0 1287 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 KLHL12Q53G59 568 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 LDLRAD3Q86YD5 345 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 RNF133Q8WVZ7 376 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 AMELYQ99218 206 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 DGCR6LQ9BY27 220 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 REEP1Q9H902 201 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 ARL2BPQ9Y2Y0 163 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 RNF114Q9Y508 228 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 KPTNQ9Y664 436 aa17.36■□□□□ 0.37
COL9A3-207ENST00000467819 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-207ENST00000467819 ACOT8O14734 319 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 TIPRLO75663 272 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 NAA10P41227 235 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-207ENST00000467819 IER3P46695 156 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 RPL15P61313 204 aaKnown RBP17.35■□□□□ 0.37
COL9A3-207ENST00000467819 IKZF1Q13422 519 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 C11orf91Q3C1V1 193 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 OR2T5Q6IEZ7 315 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 PRSS45Q7RTY3 260 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 SLC36A1Q7Z2H8 476 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 PIP4P2Q8N4L2 257 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 IQCF1Q8N6M8 205 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 OR2T29Q8NH02 315 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 PGAM5Q96HS1 289 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 SEMA6AQ9H2E6 1030 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 MAGIXQ9H6Y5 334 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 SIRT7Q9NRC8 400 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 CMC2Q9NRP2 79 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 ZNF319Q9P2F9 582 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 DNAJB11Q9UBS4 358 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 FAM96BQ9Y3D0 163 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 RHBDD3Q9Y3P4 386 aa17.35■□□□□ 0.37
COL9A3-207ENST00000467819 A0A1B0GVI7 797 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 M0QZ24 198 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 CDIPTO14735 213 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 NDUFB3O43676 98 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 DCTN3O75935 186 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 APOC1P02654 83 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 CFL1P23528 166 aaKnown RBP17.34■□□□□ 0.37
COL9A3-207ENST00000467819 GSTT1P30711 240 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 OR5T2Q8NGG2 359 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 OR52H1Q8NGJ2 320 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 LINC01006Q8NI28 216 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 TEX47Q8TBZ9 253 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 NIPSNAP1Q9BPW8 284 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 MICU1Q9BPX6 476 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 OR10A2Q9H208 303 aa17.34■□□□□ 0.37
COL9A3-207ENST00000467819 TIMM23O14925 209 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 H2BFMP0C1H6 154 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 SELLP14151 372 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 OPRL1P41146 370 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 GYS2P54840 703 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 DLX1P56177 255 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 RHOUQ7L0Q8 258 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 SHFQ7M4L6 423 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 LY6G5BQ8NDX9 201 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 CSNK2A3Q8NEV1 391 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 OR10G2Q8NGC3 310 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 H1FXQ92522 213 aaKnown RBP17.33■□□□□ 0.36
COL9A3-207ENST00000467819 DPAGT1Q9H3H5 408 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 SNTG1Q9NSN8 517 aa17.33■□□□□ 0.36
COL9A3-207ENST00000467819 PRPF19Q9UMS4 504 aaKnown RBP17.33■□□□□ 0.36
COL9A3-207ENST00000467819 PRKDCP78527 4128 aaKnown RBP17.32■□□□□ 0.36
COL9A3-207ENST00000467819 A0A1W2PRD5 423 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 A0A1W2PRF3 423 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 A0A1W2PRM7 423 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 ANXA2P2A6NMY6 339 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 H3BN98 237 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 GLCEO94923 617 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 AMY2BP19961 511 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 GNGT1P63211 74 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 IL5RAQ01344 420 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 OCLNQ16625 522 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 LRRC10Q5BKY1 277 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms