RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 MPC1Q9Y5U8 109 aa12.56□□□□□ -0.4
ATG4B-213ENST00000460211 SVEP1Q4LDE5 3571 aa12.56□□□□□ -0.4
ATG4B-213ENST00000460211 A0A0G2JMP0 313 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 A0A0X1KG70 313 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 LOC110117498-PIK3R3F6TDL0 507 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 MPZL2O60487 215 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 FAM20BO75063 409 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 MTRF1O75570 445 aaKnown RBP12.55□□□□□ -0.4
ATG4B-213ENST00000460211 PTBP3O95758 552 aaKnown RBP12.55□□□□□ -0.4
ATG4B-213ENST00000460211 PMELP40967 661 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 MPPED2Q15777 294 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 OCLNQ16625 522 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 SLC25A30Q5SVS4 291 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 THAP5Q7Z6K1 395 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 OR4M2Q8NGB6 313 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 DVL3Q92997 716 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-213ENST00000460211 Q96MT0 163 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 TBX5Q99593 518 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 APOL4Q9BPW4 351 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 TMEM165Q9HC07 324 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 TRIM36Q9NQ86 728 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 C1orf123Q9NWV4 160 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 MIOXQ9UGB7 285 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 NUFIP1Q9UHK0 495 aaKnown RBP12.55□□□□□ -0.4
ATG4B-213ENST00000460211 PCDHGB1Q9Y5G3 927 aa12.55□□□□□ -0.4
ATG4B-213ENST00000460211 hCG_1807616A0A1W2PRN6 198 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 SULT1C4O75897 302 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 ZNF205O95201 554 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 PNPP00491 289 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 CST4P01036 141 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 RPS2P15880 293 aaKnown RBP12.54□□□□□ -0.4
ATG4B-213ENST00000460211 MTNR1AP48039 350 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 ESCO2Q56NI9 601 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 BCL2L15Q5TBC7 163 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 DCAF12L2Q5VW00 463 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 PLEKHG7Q6ZR37 379 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 NLRC3Q7RTR2 1065 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 GALNT4Q8N4A0 578 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 YIPF7Q8N8F6 280 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 ZNF555Q8NEP9 628 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 SEMA6DQ8NFY4 1073 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 PIGCQ92535 297 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 LYZL4Q96KX0 146 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 MYCBPQ99417 103 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-213ENST00000460211 SLC29A1Q99808 456 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 RTL8AQ9BWD3 113 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 C8orf4Q9NR00 106 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 RHBDD3Q9Y3P4 386 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 SNX5Q9Y5X3 404 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 R4GMQ9 66 aa12.54□□□□□ -0.4
ATG4B-213ENST00000460211 TANC2Q9HCD6 1990 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 ZNF816-ZNF321PA0A0X1KG74 233 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 LOC100130705A0A1B0GUX0 176 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 A0A1W2PQL4 384 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-213ENST00000460211 METTL15A6NJ78 407 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 ZNF850A8MQ14 1090 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 CEACAM18A8MTB9 384 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 PRR32B1ATL7 298 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 J3QLI3 93 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 ENTPD6O75354 484 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 APOL3O95236 402 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 ACTC1P68032 377 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 ACTA1P68133 377 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 LCN2P80188 198 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 RIPPLY1Q0D2K3 151 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 HNRNPA0Q13151 305 aaKnown RBP12.53□□□□□ -0.4
ATG4B-213ENST00000460211 PRDX4Q13162 271 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 SCGB2A2Q13296 93 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 ZNF404Q494X3 552 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 FAM220AQ7Z4H9 259 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 RFLNBQ8N5W9 214 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 BOLLQ8N9W6 283 aaKnown RBP12.53□□□□□ -0.4
ATG4B-213ENST00000460211 OR51E1Q8TCB6 317 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 UBE2FQ969M7 185 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 MRPL48Q96GC5 212 aaKnown RBP12.53□□□□□ -0.4
ATG4B-213ENST00000460211 FAM71F1Q96KD3 344 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-213ENST00000460211 RDH12Q96NR8 316 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 MBOAT4Q96T53 435 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 RNPEPL1Q9HAU8 725 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 GPR84Q9NQS5 396 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 MRM2Q9UI43 246 aaKnown RBP12.53□□□□□ -0.4
ATG4B-213ENST00000460211 OR52A1Q9UKL2 312 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
ATG4B-213ENST00000460211 TRAV38-1A0A0B4J264 116 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 PPIAL4CA0A0B4J2A2 164 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 TMEM210A6NLX4 147 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 E9PQ18 207 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 LGALS8O00214 317 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-213ENST00000460211 NDUFA2O43678 99 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 RPP14O95059 124 aaKnown RBP12.52□□□□□ -0.41
ATG4B-213ENST00000460211 WNT2P09544 360 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 ACKR3P25106 362 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 THBS2P35442 1172 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 ZBTB37Q5TC79 503 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 DCDC5Q6ZRR9 648 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 KCTD8Q6ZWB6 473 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 ZDHHC23Q8IYP9 409 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 ELMOD2Q8IZ81 293 aa12.52□□□□□ -0.41
ATG4B-213ENST00000460211 DEFB108BQ8NET1 73 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms