RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 DCLRE1BQ9H816 532 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 S100A14Q9HCY8 104 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 A4GALTQ9NPC4 353 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 RPRD1BQ9NQG5 326 aaKnown RBP3.75□□□□□ -1.81
SDCBP-205ENST00000447267 CYSLTR2Q9NS75 346 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ZFP57Q9NU63 452 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 EXTL2Q9UBQ6 330 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 APLNQ9ULZ1 77 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 SPATA2Q9UM82 520 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 SNX6Q9UNH7 406 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 DIMT1Q9UNQ2 313 aaKnown RBP3.75□□□□□ -1.81
SDCBP-205ENST00000447267 TFR2Q9UP52 801 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ACOT9Q9Y305 439 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 RNF11Q9Y3C5 154 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 CEPT1Q9Y6K0 416 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 SESN1Q9Y6P5 492 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 IGLV2-18A0A075B6J9 118 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 ELOVL7A1L3X0 281 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 ZNF98A6NK75 572 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 L7N2F9 121 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 DVL1O14640 695 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 IMPA2O14732 288 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 SLC22A1O15245 554 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 TIMM8AO60220 97 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 EIF4E2O60573 245 aaKnown RBP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 UGDHO60701 494 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 BCAS1O75363 584 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 RBBP9O75884 186 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 SNAPINO95295 136 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 FSTL3O95633 263 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 IL6P05231 212 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 RPS17P08708 135 aaKnown RBP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 OCM2P0CE71 109 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 OCMP0CE72 109 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 DUX4L4P0CJ87 422 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 ANXA8P13928 327 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 TNFSF4P23510 183 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 PRPH2P23942 346 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 MPIP34949 423 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 MDH1P40925 334 aaKnown RBP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 APOBEC1P41238 236 aaKnown RBP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 MAGEA3P43357 314 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 MAGEA6P43360 314 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 HTR3AP46098 478 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 RGS6P49758 472 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 ERFP50548 548 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 NCBP2P52298 156 aaKnown RBP eCLIP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 ATP6V0D1P61421 351 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 GNG11P61952 73 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 TSPAN5P62079 268 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 CEACAM7Q14002 265 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 KIR2DS1Q14954 304 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 TBC1D28Q2M2D7 210 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 ABCA11PQ4W5N1 156 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 C9orf152Q5JTZ5 239 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 ANXA8L1Q5VT79 327 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 C1orf146Q5VVC0 180 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 GPR139Q6DWJ6 353 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 RAB12Q6IQ22 244 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 SPATA12Q7Z6I5 190 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 LHFPL4Q7Z7J7 247 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 LYPD6Q86Y78 171 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 ZNF614Q8N883 585 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 OR4Q3Q8NH05 313 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 OR8U1Q8NH10 309 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 C1orf54Q8WWF1 131 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 EXT2Q93063 718 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 MARC2Q969Z3 335 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 VPS33AQ96AX1 596 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 TUBGCP3Q96CW5 907 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 NOL4LQ96MY1 436 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 HIST1H2AAQ96QV6 131 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 ZNF382Q96SR6 550 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 SLC19A3Q9BZV2 496 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 FN3KQ9H479 309 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 RNPEPL1Q9HAU8 725 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 CD274Q9NZQ7 290 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 OPTCQ9UBM4 332 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 IL19Q9UHD0 177 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 LINC00527Q9UJ94 153 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 GAB2Q9UQC2 676 aa3.74□□□□□ -1.81
SDCBP-205ENST00000447267 SPIN1Q9Y657 262 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-205ENST00000447267 TMEM72A0PK05 275 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 GMNCA6NCL1 334 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 LIPT2A6NK58 231 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 CRTAPO75718 401 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-205ENST00000447267 SNAP29O95721 258 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 LYNP07948 512 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 KRT16P08779 473 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 IFI6P09912 130 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 DBTP11182 482 aaKnown RBP3.73□□□□□ -1.81
SDCBP-205ENST00000447267 G6PDP11413 515 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 SLC6A1P30531 599 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 WNT5AP41221 380 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 OR3A4PP47883 348 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 AP2S1P53680 142 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-205ENST00000447267 NCALDP61601 193 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 RAE1P78406 368 aaKnown RBP3.73□□□□□ -1.81
SDCBP-205ENST00000447267 IFITM2Q01629 132 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 OR7A5Q15622 319 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms