RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TIPRLO75663 272 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 TOX4O94842 621 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 PTBP3O95758 552 aaKnown RBP7.72□□□□□ -1.17
NUP50-206ENST00000422489 MRPL3P09001 348 aaKnown RBP7.72□□□□□ -1.17
NUP50-206ENST00000422489 PPIAL4GP0DN37 164 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 HKR1P10072 659 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 EGR1P18146 543 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 COMPP49747 757 aaPredicted RBP7.72□□□□□ -1.17
NUP50-206ENST00000422489 NPY4RP50391 375 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 CRISP1P54107 249 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 ARF6P62330 175 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 FOXL1Q12952 345 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 APOFQ13790 326 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 SLC9A3R2Q15599 337 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 SNCBQ16143 134 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 DEFB112Q30KQ8 113 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 GPR157Q5UAW9 335 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 PRSS45Q7RTY3 260 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 FAM90A1Q86YD7 464 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 C11orf53Q8IXP5 236 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 FTMTQ8N4E7 242 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 PNLDC1Q8NA58 520 aaKnown RBP7.72□□□□□ -1.17
NUP50-206ENST00000422489 CSNK2A3Q8NEV1 391 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 OR5T2Q8NGG2 359 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 OTOSQ8NHW6 89 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 ST8SIA4Q92187 359 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 SLC25A28Q96A46 364 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 SLC7A6OSQ96CW6 309 aaPredicted RBP7.72□□□□□ -1.17
NUP50-206ENST00000422489 RNF170Q96K19 258 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 LAMP5Q9UJQ1 280 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 KLHDC2Q9Y2U9 406 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 TCRBV3S1A0A5B6 114 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 ZNF879B4DU55 563 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 P2RY10O00398 339 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 TNFRSF13BO14836 293 aaPredicted RBP7.71□□□□□ -1.18
NUP50-206ENST00000422489 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 PRODHO43272 600 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 HOXA3O43365 443 aaPredicted RBP7.71□□□□□ -1.18
NUP50-206ENST00000422489 LHBP01229 141 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 LIPFP07098 398 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 SFTPBP07988 381 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 CSNK2BP67870 215 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 ELF3P78545 371 aaPredicted RBP7.71□□□□□ -1.18
NUP50-206ENST00000422489 IL5RAQ01344 420 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 PRDX4Q13162 271 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 MICBQ29980 383 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 AWAT1Q58HT5 328 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 SLC35D3Q5M8T2 416 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 METTL11BQ5VVY1 283 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 RUSC1-AS1Q66K80 236 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 BTN2A1Q7KYR7 527 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 RHOUQ7L0Q8 258 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 WDR86Q86TI4 376 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 PDZD9Q8IXQ8 264 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 GALNT4Q8N4A0 578 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 PAPD5Q8NDF8 572 aaKnown RBP7.71□□□□□ -1.18
NUP50-206ENST00000422489 FAM81AQ8TBF8 368 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 TAF15Q92804 592 aaKnown RBP eCLIP7.71□□□□□ -1.18
NUP50-206ENST00000422489 RPL3LQ92901 407 aaKnown RBP7.71□□□□□ -1.18
NUP50-206ENST00000422489 LHX4Q969G2 390 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 SEH1LQ96EE3 360 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 TEAD3Q99594 435 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 RTL8AQ9BWD3 113 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 RGCCQ9H4X1 137 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 RNPEPL1Q9HAU8 725 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 SMURF1Q9HCE7 757 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 PAPOLBQ9NRJ5 636 aaKnown RBP7.71□□□□□ -1.18
NUP50-206ENST00000422489 SNTG1Q9NSN8 517 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 H2AFY2Q9P0M6 372 aaPredicted RBP7.71□□□□□ -1.18
NUP50-206ENST00000422489 DNAJB11Q9UBS4 358 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 PCDHGB1Q9Y5G3 927 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 MPC1Q9Y5U8 109 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 DYSFO75923 2080 aa7.71□□□□□ -1.18
NUP50-206ENST00000422489 NDUFB3O43676 98 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 MITFO75030 526 aaPredicted RBP7.7□□□□□ -1.18
NUP50-206ENST00000422489 PLATP00750 562 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 ALOX5APP20292 161 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 OMGP23515 440 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 CFHR2P36980 270 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 DAPP51397 102 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 IKZF1Q13422 519 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 PTGES3Q15185 160 aaKnown RBP7.7□□□□□ -1.18
NUP50-206ENST00000422489 WDR38Q5JTN6 314 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 TEX36Q5VZQ5 186 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 C16orf87Q6PH81 154 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 KCTD18Q6PI47 426 aaPredicted RBP7.7□□□□□ -1.18
NUP50-206ENST00000422489 WDR82Q6UXN9 313 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 C9orf139Q6ZV77 190 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 MOB3CQ70IA8 216 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 BCDIN3DQ7Z5W3 292 aaKnown RBP7.7□□□□□ -1.18
NUP50-206ENST00000422489 COMMD2Q86X83 199 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 FGFRL1Q8N441 504 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 OR8B12Q8NGG6 310 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 OR5K1Q8NHB7 308 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 OR5P3Q8WZ94 311 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 PPP1R14AQ96A00 147 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 DACT3Q96B18 629 aaPredicted RBP7.7□□□□□ -1.18
NUP50-206ENST00000422489 NRBF2Q96F24 287 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 LYZL4Q96KX0 146 aa7.7□□□□□ -1.18
NUP50-206ENST00000422489 C1orf147Q96MC9 270 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms