RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 FCAMRQ8WWV6 532 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 SPTSSAQ969W0 71 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 C10orf35Q96D05 121 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 PLEK2Q9NYT0 353 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 Q9UFV3 132 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 CGGBP1Q9UFW8 167 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-204ENST00000395454 V9GYS6 101 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 CENPXA8MT69 81 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 M0R135 149 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 SGCEO43556 437 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 TNFSF13O75888 250 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 ARSBP15848 533 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 SRP9P49458 86 aaKnown RBP13.15□□□□□ -0.3
SCAF11-204ENST00000395454 TPTEP56180 551 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 PCBD1P61457 104 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 QRFPP83859 136 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 GUSBP1Q15486 140 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 NUFIP2Q7Z417 695 aaKnown RBP13.15□□□□□ -0.3
SCAF11-204ENST00000395454 OR4D6Q8NGJ1 314 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 LYZL4Q96KX0 146 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 DIABLOQ9NR28 239 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 ANKRD20A5PA0PJZ0 165 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 HMX3A6NHT5 357 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 BPNT1O95861 308 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 IGHV3-9P01782 118 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 MMP7P09237 267 aaPredicted RBP13.14□□□□□ -0.31
SCAF11-204ENST00000395454 B4GALT1P15291 398 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 BMP5P22003 454 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 RAG2P55895 527 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 AP3S2P59780 193 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 GALK2Q01415 458 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 SSBP1Q04837 148 aaKnown RBP13.14□□□□□ -0.31
SCAF11-204ENST00000395454 TATDN3Q17R31 274 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 C4orf17Q53FE4 359 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 TSPO2Q5TGU0 170 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 OLFML2AQ68BL7 652 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 KRT74Q7RTS7 529 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 GLCCI1Q86VQ1 547 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 OR52N4Q8NGI2 321 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 OR6F1Q8NGZ6 308 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 OR1F12Q8NHA8 337 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 CCDC120Q96HB5 630 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 SOX7Q9BT81 388 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 CNTD2Q9H8S5 307 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 FLNCQ14315 2725 aa13.14□□□□□ -0.31
SCAF11-204ENST00000395454 C5orf63A6NC05 138 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 NAP1L6A6NFF2 107 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 H7C417 338 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 DHRS3O75911 302 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 CRHP06850 196 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF20P17024 532 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 UTS2BQ765I0 119 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 CDH24Q86UP0 819 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF100Q8IYN0 542 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 JAGN1Q8N5M9 183 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 OR6K3Q8NGY3 331 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 APH1AQ96BI3 265 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 PGAM5Q96HS1 289 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 NUDT16L1Q9BRJ7 211 aaKnown RBP13.13□□□□□ -0.31
SCAF11-204ENST00000395454 SFXN3Q9BWM7 321 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 DPAGT1Q9H3H5 408 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 MTFP1Q9UDX5 166 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 TIMM10BQ9Y5J6 103 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 F5H5K5 113 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF32P17041 273 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 OPRM1P35372 400 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 THBS4P35443 961 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 GNALP38405 381 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 PSG4Q00888 419 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 RSBN1Q5VWQ0 802 aaPredicted RBP13.13□□□□□ -0.31
SCAF11-204ENST00000395454 NAA40Q86UY6 237 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 OR13C9Q8NGT0 318 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 GCDHQ92947 438 aaPredicted RBP13.13□□□□□ -0.31
SCAF11-204ENST00000395454 STARD4Q96DR4 205 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 OR2H1Q9GZK4 316 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 KCNK15Q9H427 330 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 SLC7A10Q9NS82 523 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF629Q9UEG4 869 aaPredicted RBP13.13□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF391Q9UJN7 358 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 NUBP2Q9Y5Y2 271 aa13.13□□□□□ -0.31
SCAF11-204ENST00000395454 C7orf66A4D0T2 115 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 SULT1C2O00338 296 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 KDM4BO94953 1096 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 DBHP09172 617 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 PRF1P14222 555 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 SNTB2Q13425 540 aaKnown RBP13.12□□□□□ -0.31
SCAF11-204ENST00000395454 CARTPTQ16568 116 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 SKA3Q8IX90 412 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 PP6455Q8WZ26 134 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 SLC7A6Q92536 515 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 FAM71F1Q96KD3 344 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-204ENST00000395454 C1orf147Q96MC9 270 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-204ENST00000395454 WNT5BQ9H1J7 359 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 COQ3Q9NZJ6 369 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF224Q9NZL3 707 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 PROCRQ9UNN8 238 aa13.12□□□□□ -0.31
SCAF11-204ENST00000395454 EEF1E1-BLOC1S5C9J1V9 151 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 INMT-MINDY4F8WBC2 141 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 TCRBP04435 133 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms