RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SLCO1A2P46721 670 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 MEOX2P50222 304 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 PRKXP51817 358 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 BTN3A2P78410 334 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 FGL1Q08830 312 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 ASPHQ12797 758 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 TRIP13Q15645 432 aaPredicted RBP4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 KRTAP27-1Q3LI81 207 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 PIGGQ5H8A4 983 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 METTL11BQ5VVY1 283 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 DUPD1Q68J44 220 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 RTL4Q6ZR62 310 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 P2RY8Q86VZ1 359 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 LRRC25Q8N386 305 aaPredicted RBP4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 CD177Q8N6Q3 437 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 UBL4BQ8N7F7 174 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR5D13Q8NGL4 314 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR13F1Q8NGS4 319 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 NEIL3Q8TAT5 605 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 MRAPQ8TCY5 172 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 PAQR8Q8TEZ7 354 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF721Q8TF20 911 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 HAVCR1Q96D42 359 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 MS4A6EQ96DS6 147 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 TSNARE1Q96NA8 513 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC35A5Q9BS91 424 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 NIPSNAP3BQ9BS92 247 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 CAPS2Q9BXY5 557 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 CHIAQ9BZP6 476 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 PRTFDC1Q9NRG1 225 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 B4GALT7Q9UBV7 327 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF629Q9UEG4 869 aaPredicted RBP4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 WARS2Q9UGM6 360 aaKnown RBP4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 FBXO5Q9UKT4 447 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 POLDIP2Q9Y2S7 368 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 MMACHCQ9Y4U1 282 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 CHCHD2Q9Y6H1 151 aaPredicted RBP4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF407Q9C0G0 2248 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 DEFB108AA8MXU0 73 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 GOLGA8MH3BSY2 632 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 KIF2AO00139 706 aaPredicted RBP4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 PSMD12O00232 456 aaPredicted RBP4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 CTNSO60931 367 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 BANF1O75531 89 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 CLPSP04118 112 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 C8GP07360 202 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 TPM1P09493 284 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 DBTP11182 482 aaKnown RBP4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 GABRA1P14867 456 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 BASP1P80723 227 aaKnown RBP4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 CDK16Q00536 496 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 TNFRSF17Q02223 184 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 PRR4Q16378 134 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 TRIM16LQ309B1 348 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 TTLL9Q3SXZ7 439 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 PAGE2BQ5JRK9 111 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 UTF1Q5T230 341 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 PRAMEF20Q5VT98 475 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 SBSNQ6UWP8 590 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 HSDL2Q6YN16 418 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 ABHD13Q7L211 337 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 THOC6Q86W42 341 aaKnown RBP4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF525Q8N782 197 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 MORN4Q8NDC4 146 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 BHLHE23Q8NDY6 225 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR10G3Q8NGC4 313 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR8J1Q8NGP2 316 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 UCN3Q969E3 161 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 PPWD1Q96BP3 646 aaKnown RBP4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 PANX2Q96RD6 677 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 KIR2DL4Q99706 377 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 ANP32EQ9BTT0 268 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 C19orf24Q9BVV8 132 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 FRMD8P1Q9BZ68 369 aaPredicted RBP4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR8D2Q9GZM6 311 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF385DQ9H6B1 395 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 ADAP2Q9NPF8 381 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 FANCFQ9NPI8 374 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 C20orf96Q9NUD7 363 aaPredicted RBP4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC22A14Q9Y267 594 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 IKBKGQ9Y6K9 419 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 MEGF8Q7Z7M0 2845 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 SVEP1Q4LDE5 3571 aa4.12□□□□□ -1.75
RNU4-39P-201ENST00000362455 A0A1B0GWB2 263 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 CDC7O00311 574 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 PHOX2AO14813 284 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 ERI3O43414 337 aaKnown RBP4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 C1QAP02745 245 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 P04436 131 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 CCDC166P0CW27 439 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 HSMCR30P0CW71 290 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 NCK1P16333 377 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZP3P21754 424 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 FGF9P31371 208 aaPredicted RBP4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 OPRM1P35372 400 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 LEPP41159 167 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 KIR2DS2P43631 304 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 EFNB2P52799 333 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 RAB38P57729 211 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 IGLV3-21P80748 117 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms