RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ARHGAP21Q5T5U3 1957 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 MED12LQ86YW9 2145 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 CHD8Q9HCK8 2581 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 PSMD9O00233 223 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 GABRPO00591 440 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 GATCO43716 136 aaKnown RBP11.16□□□□□ -0.62
DDX39A-202ENST00000324340 SSNA1O43805 119 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 SRSF10O75494 262 aaKnown RBP11.16□□□□□ -0.62
DDX39A-202ENST00000324340 RP2O75695 350 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 RGS9O75916 674 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-202ENST00000324340 TOXO94900 526 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 ECDO95905 644 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-202ENST00000324340 IGHV3-9P01782 118 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 CXCL3P19876 107 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-202ENST00000324340 MEOX2P50222 304 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 MECP2P51608 486 aaKnown RBP11.16□□□□□ -0.62
DDX39A-202ENST00000324340 TSPAN5P62079 268 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 ELP2Q6IA86 826 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 CORO6Q6QEF8 472 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 PCSK4Q6UW60 755 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 LRRN1Q6UXK5 716 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 GFRALQ6UXV0 394 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 KRT77Q7Z794 578 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 SYT9Q86SS6 491 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 SLC22A24Q8N4F4 322 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 TOMM5Q8N4H5 51 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 GJC3Q8NFK1 279 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 OR4D10Q8NGI6 311 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 SLAMF6Q96DU3 332 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 SMIM19Q96E16 107 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 PLEKHA1Q9HB21 404 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 PLSCR4Q9NRQ2 329 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 PRSS50Q9UI38 385 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 IKZF2Q9UKS7 526 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 POLR1DQ9Y2S0 133 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 LRP12Q9Y561 859 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 MCRIP1C9JLW8 97 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 ZNF878C9JN71 531 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 TEX46H3BTG2 121 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 PRRG2O14669 202 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 TNFSF13O75888 250 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 B4GALT1P15291 398 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 CTSSP25774 331 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 MPGP29372 298 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 S100A11P31949 105 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 CEACAM8P31997 349 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-202ENST00000324340 PSMB10P40306 273 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 CCR9P51686 369 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 AP3S2P59780 193 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 NANOS3P60323 173 aaKnown RBP11.16□□□□□ -0.62
DDX39A-202ENST00000324340 ZMYND11Q15326 602 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 ST3GAL2Q16842 350 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 LIN54Q6MZP7 749 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 DOLPP1Q86YN1 238 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 GCNT2Q8N0V5 402 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 OR1M1Q8NGA1 313 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 FBXO17Q96EF6 278 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 DOCK7Q96N67 2140 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 C12orf49Q9H741 205 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 GPN1Q9HCN4 374 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-202ENST00000324340 ABRACLQ9P1F3 81 aa11.16□□□□□ -0.62
DDX39A-202ENST00000324340 USP24Q9UPU5 2620 aa11.15□□□□□ -0.62
DDX39A-202ENST00000324340 TRBV2A0A0J9YWF9 115 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 TMEM82A0PJX8 343 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 RER1O15258 196 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 GPRIN2O60269 458 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 FARS2O95363 451 aaKnown RBP11.15□□□□□ -0.63
DDX39A-202ENST00000324340 CGAP01215 116 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 ITGA5P08648 1049 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 RIDAP52758 137 aaKnown RBP11.15□□□□□ -0.63
DDX39A-202ENST00000324340 FOXG1P55316 489 aaPredicted RBP11.15□□□□□ -0.63
DDX39A-202ENST00000324340 ARF1P84077 181 aaKnown RBP11.15□□□□□ -0.63
DDX39A-202ENST00000324340 RBPJQ06330 500 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 FOXF2Q12947 444 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 ALKBH1Q13686 389 aaKnown RBP11.15□□□□□ -0.63
DDX39A-202ENST00000324340 GK2Q14410 553 aaPredicted RBP11.15□□□□□ -0.63
DDX39A-202ENST00000324340 OR7E24Q6IFN5 339 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 ARL9Q6T311 187 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF813Q6ZN06 617 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF704Q6ZNC4 412 aaPredicted RBP11.15□□□□□ -0.63
DDX39A-202ENST00000324340 TMEM91Q6ZNR0 172 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 Q6ZT83 130 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 SKA3Q8IX90 412 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 LRRC18Q8N456 261 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 HSD17B8Q92506 261 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 GHSRQ92847 366 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 TMEM203Q969S6 136 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 BOD1Q96IK1 185 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 SAV1Q9H4B6 383 aaPredicted RBP11.15□□□□□ -0.63
DDX39A-202ENST00000324340 FRRS1LQ9P0K9 344 aa11.15□□□□□ -0.63
DDX39A-202ENST00000324340 PHF3Q92576 2039 aaKnown RBP11.15□□□□□ -0.63
DDX39A-202ENST00000324340 GTF3C1Q12789 2109 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 TRAV6A0A075B6T7 132 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 OR4C45A6NMZ5 311 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 TTLL8A6PVC2 850 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 LRRTM2O43300 516 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 EEF1E1O43324 174 aaKnown RBP11.14□□□□□ -0.63
DDX39A-202ENST00000324340 RPP14O95059 124 aaKnown RBP11.14□□□□□ -0.63
DDX39A-202ENST00000324340 IL18BPO95998 194 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms