RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CASP3P42574 277 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 LIM2P55344 173 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PARS2Q7L3T8 475 aaKnown RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 OSTM1Q86WC4 334 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 OR2M7Q8NG81 312 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 OR2A5Q96R48 311 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 COMMD5Q9GZQ3 224 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CHST5Q9GZS9 411 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ZNF223Q9UK11 482 aaPredicted RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 PIGLQ9Y2B2 252 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 FLVCR1Q9Y5Y0 555 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 KIAA1549LQ6ZVL6 1849 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CFIP05156 583 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CFPP27918 469 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 C2orf27AQ580R0 203 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 VASNQ6EMK4 673 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 C1orf210Q8IVY1 113 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TMEM242Q9NWH2 141 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CES1P1Q9UKY3 287 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ZDHHC8Q9ULC8 765 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 MGAT3Q09327 533 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PWWP2BQ6NUJ5 590 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 C8orf82Q6P1X6 216 aaPredicted RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 C17orf78Q8N4C9 275 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SLC26A10Q8NG04 563 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 LIPHQ8WWY8 451 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 DECR2Q9NUI1 292 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 IER3IP1Q9Y5U9 82 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 OBSL1O75147 1896 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 YLPM1P49750 1951 aaKnown RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 C19orf67A6NJJ6 358 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 NTF3P20783 257 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 STAC2Q6ZMT1 411 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ZNF66Q6ZN08 573 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TSEN54Q7Z6J9 526 aaKnown RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 OR10Z1Q8NGY1 313 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 NRG4Q8WWG1 115 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SFXN3Q9BWM7 321 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 LTB4R2Q9NPC1 389 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 WBP1LQ9NX94 342 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PHF1O43189 567 aaPredicted RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 CXorf1O96002 111 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SOD3P08294 240 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 LIPCP11150 499 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 UBE2G1P62253 170 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TMEM267Q0VDI3 215 aaPredicted RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 ELOBQ15370 118 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 NSUN5P2Q63ZY6 315 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 RELTQ969Z4 430 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 GNRHR2Q96P88 292 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CABLES2Q9BTV7 478 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TXNRD2Q9NNW7 524 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 B4DGG1 531 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 B4GALT2O60909 372 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TBX18O95935 607 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 HLA-DQA1P01909 254 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CSF2P04141 144 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PPP1CBP62140 327 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ARG2P78540 354 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ROM1Q03395 351 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TMEM71Q6P5X7 295 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TMEM108Q6UXF1 575 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 LRRTM1Q86UE6 522 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 DMBX1Q8NFW5 382 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 RAB8BQ92930 207 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 YIPF6Q96EC8 236 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TRAPPC2LQ9UL33 140 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 A0A1W2PP55 124 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 UTS2O95399 124 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 INHBBP09529 407 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 DEFA4P12838 97 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 ZNF8P17098 575 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 BLVRBP30043 206 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 DBX2Q6ZNG2 339 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 TCRBV5S2A0A599 114 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 LINC00862A6NCI5 91 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 SCRG1O75711 98 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 IGHA2P01877 340 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 CRHP06850 196 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 HOXA1P49639 335 aaPredicted RBP3.62□□□□□ -1.83
USH2A-201ENST00000307340 P2RY6Q15077 328 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 DHRS13Q6UX07 377 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 MRGPRGQ86SM5 289 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PPP1R1CQ8WVI7 109 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 B4E171 279 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 M0R135 149 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 HOXA6P31267 233 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 C12orf73Q69YU5 71 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PRSS42Q7Z5A4 293 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 CYB5D2Q8WUJ1 264 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 ZNF799Q96GE5 643 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 TMEM30CPA0ZSE6 113 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 OOEPA6NGQ2 149 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 S1PR2O95136 353 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 CST2P09228 141 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 PCSK6P29122 969 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 GPR82Q96P67 336 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 NOX4Q9NPH5 578 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 MARCH5Q9NX47 278 aa3.62□□□□□ -1.83
USH2A-201ENST00000307340 CCL23P55773 120 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms