RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 MAFIPQ8WZ33 124 aa16.11■□□□□ 0.17
SHKBP1-201ENST00000291842 ELL3Q9HB65 397 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-201ENST00000291842 FOXD3Q9UJU5 478 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-201ENST00000291842 NCKAP5O14513 1909 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 ZSCAN5BA6NJL1 495 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 M0R135 149 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 NMBP08949 121 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 RPA2P15927 270 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 SERPINA2P20848 420 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 CTSSP25774 331 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 PTGFRP43088 359 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 GSK3AP49840 483 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 ARFRP1Q13795 201 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 GK2Q14410 553 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 ZNF660Q6AZW8 331 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 PPP1R32Q7Z5V6 425 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 SSC4DQ8WTU2 575 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 ROBO4Q8WZ75 1007 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 ZNF799Q96GE5 643 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 ST6GALNAC5Q9BVH7 336 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 KIF25Q9UIL4 384 aa16.1■□□□□ 0.17
SHKBP1-201ENST00000291842 EFSO43281 561 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 P04436 131 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 PATE4P0C8F1 98 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 FCGR2AP12318 317 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 NPY4RP50391 375 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 ZDHHC22Q8N966 263 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 OR2AE1Q8NHA4 323 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 PPP1R1CQ8WVI7 109 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 RBPMSQ93062 196 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 COQ3Q9NZJ6 369 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 SHOXO15266 292 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 KCNAB3O43448 404 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 B3GALNT1O75752 331 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 TRAPPC6AO75865 159 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 DHRS3O75911 302 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 PI3P19957 117 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 ATP1B3P54709 279 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 B3GALT5-AS1P59052 145 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 ECH1Q13011 328 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 PNLDC1Q8NA58 520 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 SCARB1Q8WTV0 552 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 NTNG2Q96CW9 530 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 OR10A2Q9H208 303 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 TCFL5Q9UL49 500 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 PADI1Q9ULC6 663 aa16.09■□□□□ 0.17
SHKBP1-201ENST00000291842 EEF1E1-BLOC1S5C9J1V9 151 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 CD8AP01732 235 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 RLN2P04090 185 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 GSTP1P09211 210 aaKnown RBP16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 MPZP25189 248 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 MPGP29372 298 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 TIPARPQ7Z3E1 657 aaKnown RBP16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 TMEM105Q8N8V8 129 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 OR56B1Q8NGI3 324 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 MITD1Q8WV92 249 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 FBXW5Q969U6 566 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 WBP1Q96G27 269 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 PHB2Q99623 299 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 NUDT16L1Q9BRJ7 211 aaKnown RBP16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 CRLF2Q9HC73 371 aa16.08■□□□□ 0.17
SHKBP1-201ENST00000291842 CCDC187A0A096LP49 1063 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 hCG_1807616A0A1W2PRN6 198 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 SNAPC5O75971 98 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 IGLV3-1P01715 115 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 MGMTP16455 207 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 ZNF84P51523 738 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 CARD18P57730 90 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 ZXDAP98168 799 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 BAMBIQ13145 260 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 WIPI1Q5MNZ9 446 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 DCAF12Q5T6F0 453 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 SLC23A3Q6PIS1 610 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 FOXL2NBQ6ZUU3 175 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 C20orf196Q8IYI0 205 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 ESX1Q8N693 406 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 RELL2Q8NC24 303 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 SUN5Q8TC36 379 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 ZC3H10Q96K80 434 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 ALKBH3Q96Q83 286 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 URM1Q9BTM9 101 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 SDHAF2Q9NX18 166 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 PRR13Q9NZ81 148 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 COMMD9Q9P000 198 aa16.08■□□□□ 0.16
SHKBP1-201ENST00000291842 SDCBPO00560 298 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 MFNGO00587 321 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 CXCL13O43927 109 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 IL2RAP01589 272 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 BLVRBP30043 206 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 SUCLG1P53597 346 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 RGS7BPQ6MZT1 257 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 DEFB123Q8N688 67 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 RHBDD1Q8TEB9 315 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 REG4Q9BYZ8 158 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 V9GYS6 101 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 KIAA1549Q9HCM3 1950 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 A0A0U1RQV5 110 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 C13orf42A0A1B0GVH6 325 aa16.07■□□□□ 0.16
SHKBP1-201ENST00000291842 HTR3BO95264 441 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms