RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 C2orf50Q96LR7 162 aa14.93□□□□□ -0.02
PHRF1-201ENST00000264555 MEIKINA0A087WXM9 373 aa14.93□□□□□ -0.02
PHRF1-201ENST00000264555 MPPED1O15442 326 aa14.93□□□□□ -0.02
PHRF1-201ENST00000264555 ADRA2CP18825 462 aa14.93□□□□□ -0.02
PHRF1-201ENST00000264555 EDDM3BP56851 147 aa14.93□□□□□ -0.02
PHRF1-201ENST00000264555 TAS2R30P59541 319 aa14.93□□□□□ -0.02
PHRF1-201ENST00000264555 TMEM68Q96MH6 324 aa14.93□□□□□ -0.02
PHRF1-201ENST00000264555 C4orf51C9J302 202 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 PPP1R1CQ8WVI7 109 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 WDR89Q96FK6 387 aaPredicted RBP14.92□□□□□ -0.02
PHRF1-201ENST00000264555 NINQ8N4C6 2090 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 TUBAL3A6NHL2 446 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 NUDT19A8MXV4 375 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 SPRY1O43609 319 aaPredicted RBP14.92□□□□□ -0.02
PHRF1-201ENST00000264555 CDX2Q99626 313 aaPredicted RBP14.92□□□□□ -0.02
PHRF1-201ENST00000264555 TMEM100Q9NV29 134 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 PROCRQ9UNN8 238 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 ANKRD20A5PA0PJZ0 165 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 SHISA7A6NL88 538 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 INSM1Q01101 510 aaPredicted RBP14.92□□□□□ -0.02
PHRF1-201ENST00000264555 EIF2S3LQ2VIR3 472 aaKnown RBP14.92□□□□□ -0.02
PHRF1-201ENST00000264555 KCNRGQ8N5I3 272 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 MALSU1Q96EH3 234 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 PCDHB10Q9UN67 800 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 IGHV5-10-1A0A0J9YXX1 117 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 SMIM10L1P0DMW3 83 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 F2RL1P55085 397 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 RPS23P62266 143 aaKnown RBP14.92□□□□□ -0.02
PHRF1-201ENST00000264555 OR52W1Q6IF63 320 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 GALNT16Q8N428 558 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 SMIM10Q96HG1 83 aa14.92□□□□□ -0.02
PHRF1-201ENST00000264555 MSL3P1P0C860 447 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 GLI4P10075 376 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 HIST1H1DP16402 221 aaKnown RBP14.91□□□□□ -0.02
PHRF1-201ENST00000264555 PTGFRP43088 359 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 EDDM3AQ14507 147 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 OR8B8Q15620 311 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 ZBTB37Q5TC79 503 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 JMJD6Q6NYC1 403 aaPredicted RBP14.91□□□□□ -0.02
PHRF1-201ENST00000264555 RBMS3Q6XE24 437 aaKnown RBP14.91□□□□□ -0.02
PHRF1-201ENST00000264555 TCTEX1D2Q8WW35 142 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 FSCN3Q9NQT6 498 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 TEX261Q6UWH6 196 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 S100PBPQ96BU1 408 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 WFDC6Q9BQY6 131 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 ZNF416Q9BWM5 594 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 U3KQ87 197 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 IL2RAP01589 272 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 USF2Q15853 346 aaPredicted RBP14.91□□□□□ -0.02
PHRF1-201ENST00000264555 CDH26Q8IXH8 852 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 ZC3HAV1LQ96H79 300 aaKnown RBP14.91□□□□□ -0.02
PHRF1-201ENST00000264555 PLEKHA2Q9HB19 425 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 OR4C45A6NMZ5 311 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 ANGPTL7O43827 346 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 TPPPO94811 219 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 M6PRP20645 277 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 PIGPP57054 158 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 GGTLC2Q14390 218 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 RTN4IP1Q8WWV3 396 aaPredicted RBP14.91□□□□□ -0.02
PHRF1-201ENST00000264555 PLA2G3Q9NZ20 509 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 PNLIPP16233 465 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 RNPS1Q15287 305 aaKnown RBP14.91□□□□□ -0.02
PHRF1-201ENST00000264555 OR52N4Q8NGI2 321 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 OR10D3Q8NH80 312 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 PFDN5Q99471 154 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 CHST6Q9GZX3 395 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 RAB33BQ9H082 229 aa14.91□□□□□ -0.02
PHRF1-201ENST00000264555 ZNF732B4DXR9 585 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 TERTO14746 1132 aaKnown RBP14.9□□□□□ -0.02
PHRF1-201ENST00000264555 ACSM4P0C7M7 580 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 RPL35P42766 123 aaKnown RBP14.9□□□□□ -0.02
PHRF1-201ENST00000264555 MRPS34P82930 218 aaKnown RBP14.9□□□□□ -0.02
PHRF1-201ENST00000264555 MED30Q96HR3 178 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 CNTD2Q9H8S5 307 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 OTOFQ9HC10 1997 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 LRRC30A6NM36 301 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 A8MXE2 369 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 RAB1AP62820 205 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 ARF1P84077 181 aaKnown RBP14.9□□□□□ -0.02
PHRF1-201ENST00000264555 HIPK2Q9H2X6 1198 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 RFPL4AA6NLU0 287 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 E5RGE8 158 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 RFPL4AL1F8VTS6 287 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 SIRPB1O00241 398 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 EFSO43281 561 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 IFNA10P01566 189 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 FAM157BP0CG42 384 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 RPL12P30050 165 aaKnown RBP14.9□□□□□ -0.02
PHRF1-201ENST00000264555 UBE2KP61086 200 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 SOHLH1Q5JUK2 328 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 SPICQ8N5J4 248 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 DECR2Q9NUI1 292 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 SLC39A9Q9NUM3 307 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 NSG2Q9Y328 171 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 TRGV5A0A0B4J1U4 118 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 HOXA1P49639 335 aaPredicted RBP14.9□□□□□ -0.02
PHRF1-201ENST00000264555 RAC3P60763 192 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 ZNF79Q15937 498 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 ARHGAP5-AS1Q96IT6 56 aa14.9□□□□□ -0.02
PHRF1-201ENST00000264555 GCM1Q9NP62 436 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms