RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 IGKV3D-15A0A087WSY6 115 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 TMEM82A0PJX8 343 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 DHRS7CA6NNS2 312 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 TSC22D2O75157 780 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 MRPL33O75394 65 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 SYNGR4O95473 234 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 CELA3AP09093 270 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 GSTP1P09211 210 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF735P0CB33 412 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF32P17041 273 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 PTGFRP43088 359 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 MAGEA5P43359 124 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 CLDN18P56856 261 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 GNG2P59768 71 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 RAP2BP61225 183 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 UBE2V2Q15819 145 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 SNAI3Q3KNW1 292 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 C4orf46Q504U0 113 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF767PQ75MW2 155 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 SLC16A14Q7RTX9 510 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 SEMA6DQ8NFY4 1073 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 OR4S1Q8NGB4 309 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 OR56B1Q8NGI3 324 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 NPRL2Q8WTW4 380 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 SGK3Q96BR1 496 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 RAB3CQ96E17 227 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 PRRT1Q99946 306 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 POFUT1Q9H488 388 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 BANF2Q9H503 90 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF224Q9NZL3 707 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 PLEKHA6Q9Y2H5 1048 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 OR6C6A6NF89 314 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 A6NL46 340 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 KLRC4-KLRK1H3BQV0 150 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 FARS2O95363 451 aaKnown RBP11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 SP1P08047 785 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 FCGR2AP12318 317 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF708P17019 499 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 ALDH3B1P43353 468 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 HTR5AP47898 357 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 ZMYND11Q15326 602 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 SCGB2B2Q4G0G5 96 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 GLRX5Q86SX6 157 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 MUC20Q8N307 709 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 AKR7LQ8NHP1 331 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 S100A13Q99584 98 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 SLC6A7Q99884 636 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 OR2H1Q9GZK4 316 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 SLC6A15Q9H2J7 730 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 CA10Q9NS85 328 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 PARPBPQ9NWS1 579 aa11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 EIF3KQ9UBQ5 218 aaKnown RBP11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 MCTS1Q9ULC4 181 aaKnown RBP11.31□□□□□ -0.6
SPTLC1-201ENST00000262554 A0A0A6YYD4 124 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 CDK2AP1O14519 115 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 NME2P1O60361 137 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 OR2A4O95047 310 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 LCATP04180 440 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 CSN2P05814 226 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF24P17028 368 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 TBPP20226 339 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 NME2P22392 152 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 MPZP25189 248 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 PSG4Q00888 419 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 NKPD1Q17RQ9 610 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 NRN1LQ496H8 165 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 SFRP5Q5T4F7 317 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 CD163Q86VB7 1156 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 TMEM251Q8N6I4 163 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 GVQW1Q8N7I0 195 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 SUMF1Q8NBK3 374 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 TNFAIP8L1Q8WVP5 186 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 HAS2Q92819 552 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 REEP6Q96HR9 211 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 RADILQ96JH8 1075 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 OR2A7Q96R45 310 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 LINC00470Q9BZP3 86 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 MYOZ1Q9NP98 299 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 SLC2A8Q9NY64 477 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 PIPOXQ9P0Z9 390 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF391Q9UJN7 358 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 KCNK7Q9Y2U2 307 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 KNTC1P50748 2209 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 AHCTF1Q8WYP5 2266 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 PCNX2A6NKB5 2137 aa11.3□□□□□ -0.6
SPTLC1-201ENST00000262554 SOCS1O15524 211 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 TOXO94900 526 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 TPOP07202 933 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 PATE4P0C8F1 98 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 HIST1H1DP16402 221 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 CD82P27701 267 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 MEOX1P50221 254 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 RPS27AP62979 156 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 CXADRP78310 365 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 PNLIPRP3Q17RR3 467 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 KRTAP27-1Q3LI81 207 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 DMRTC1Q5HYR2 192 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 OR52W1Q6IF63 320 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms