RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 C11orf54Q9H0W9 315 aaPredicted RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 PLA2G10O15496 165 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 TOXO94900 526 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 CGAP01215 116 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 SERPINA5P05154 406 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 CCL2P13500 99 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 RAB6AP20340 208 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 GSK3AP49840 483 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 TAS2R20P59543 309 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 UBE2V2Q15819 145 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 C3P1Q6ZMU1 363 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 NRARPQ7Z6K4 114 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 PNLDC1Q8NA58 520 aaKnown RBP15.73■□□□□ 0.11
VIM-201ENST00000224237 YIPF5Q969M3 257 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 SLX1AQ9BQ83 275 aa15.73■□□□□ 0.11
VIM-201ENST00000224237 GGT3PA6NGU5 568 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 HOXC12P31275 282 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 DGCR2P98153 550 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 MALLQ13021 153 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 TNK1Q13470 666 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 ANGPTL5Q86XS5 388 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 ZNF75AQ96N20 296 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 SPACA5Q96QH8 159 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 GPER1Q99527 375 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 ATG5Q9H1Y0 275 aa15.72■□□□□ 0.11
VIM-201ENST00000224237 GABARAPH6UMI1 98 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 LANCL1O43813 399 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 RFX2P48378 723 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 CNN3Q15417 329 aaKnown RBP15.71■□□□□ 0.11
VIM-201ENST00000224237 KISS1Q15726 138 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 ZBTB37Q5TC79 503 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 MZT2BQ6NZ67 158 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 BEND4Q6ZU67 534 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 SLC30A7Q8NEW0 376 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 ITFG2Q969R8 447 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 SPSB1Q96BD6 273 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 MS4A3Q96HJ5 214 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 TP63Q9H3D4 680 aaPredicted RBP15.71■□□□□ 0.11
VIM-201ENST00000224237 OPA3Q9H6K4 179 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 NEK6Q9HC98 313 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 RAB22AQ9UL26 194 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 A0A0A6YYH2 397 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 MED19A0JLT2 244 aaPredicted RBP15.71■□□□□ 0.11
VIM-201ENST00000224237 A6NJ64 397 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 PRRG2O14669 202 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 LYRM1O43325 122 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 SSX4O60224 188 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 CD3GP09693 182 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 PMPCAQ10713 525 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 P2RY6Q15077 328 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 TBC1D28Q2M2D7 210 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 CLVS2Q5SYC1 327 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 TMEM42Q69YG0 159 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 ZNF610Q8N9Z0 462 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 HPS1Q92902 700 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 CPNE2Q96FN4 548 aaPredicted RBP15.71■□□□□ 0.11
VIM-201ENST00000224237 FBLN5Q9UBX5 448 aa15.71■□□□□ 0.11
VIM-201ENST00000224237 MRPS28Q9Y2Q9 187 aaKnown RBP15.71■□□□□ 0.11
VIM-201ENST00000224237 INTS1Q8N201 2190 aaKnown RBP15.71■□□□□ 0.1
VIM-201ENST00000224237 UBBP0CG47 229 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 ZNF14P17017 642 aaPredicted RBP15.7■□□□□ 0.1
VIM-201ENST00000224237 PLA2G5P39877 138 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 OR3A4PP47883 348 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 RNASE12Q5GAN4 147 aaKnown RBP15.7■□□□□ 0.1
VIM-201ENST00000224237 BIVMQ86UB2 503 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 ZNF101Q8IZC7 436 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 C17orf78Q8N4C9 275 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 NAXEQ8NCW5 288 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 NPRL2Q8WTW4 380 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 SNRNP40Q96DI7 357 aaKnown RBP15.7■□□□□ 0.1
VIM-201ENST00000224237 TECTBQ96PL2 329 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 REPIN1Q9BWE0 567 aaKnown RBP15.7■□□□□ 0.1
VIM-201ENST00000224237 OPN3Q9H1Y3 402 aaPredicted RBP15.7■□□□□ 0.1
VIM-201ENST00000224237 AUNIPQ9H7T9 357 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 GPR173Q9NS66 373 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 RBFOX1Q9NWB1 397 aaKnown RBP15.7■□□□□ 0.1
VIM-201ENST00000224237 NPAP1Q9NZP6 1156 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 ATRXP46100 2492 aa15.7■□□□□ 0.1
VIM-201ENST00000224237 ZNF816-ZNF321PA0A0X1KG74 233 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 METTL21EPA6NDL7 271 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 J3QW42 95 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 GMDSO60547 372 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 KDM4BO94953 1096 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 VSIG8P0DPA2 414 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 QRFPP83859 136 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 GK2Q14410 553 aaPredicted RBP15.69■□□□□ 0.1
VIM-201ENST00000224237 OR10K2Q6IF99 312 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 GLIPR1L1Q6UWM5 242 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 OR2W3Q7Z3T1 314 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 TOMM5Q8N4H5 51 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 ENKURQ8TC29 256 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 FCAMRQ8WWV6 532 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 SFXN3Q9BWM7 321 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 GHRLQ9UBU3 117 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 KCNN3Q9UGI6 736 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 SPTA1P02549 2419 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 TMEM14DPA8MWL7 114 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 NRASP01111 189 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 PRKACBP22694 351 aa15.69■□□□□ 0.1
VIM-201ENST00000224237 CEACAM8P31997 349 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms