RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Rab42Q0PD08 215 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Hectd3Q3U487 861 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm6899Q3USS0 134 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Lefty1Q64280 368 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Slc22a18Q78KK3 406 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Coro2bQ8BH44 480 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Cnppd1Q8K158 407 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Ccdc58Q8R3Q6 144 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Ntng2Q8R4F1 589 aaKnown RBP13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Mfsd4b1Q8VCV9 425 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Calhm2Q8VEC4 323 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr803Q8VFI3 308 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr1217Q8VGG1 304 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Slc39a8Q91W10 462 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gorasp2Q99JX3 451 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tmem42Q9CR22 157 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 4930447A16RikQ9D5F6 132 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 PacrgQ9DAK2 241 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gk2Q9WU65 554 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Orc6Q9WUJ8 262 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Vmn2r113E9PZA6 856 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm8050L7N2E3 205 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Zfp36l2P23949 484 aaKnown RBP13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 AgrpP56473 131 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Coq7P97478 217 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 HgfQ08048 728 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Wdr34Q5U4F6 535 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Csnk2a1Q60737 391 aaKnown RBP13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tbl1xr1Q8BHJ5 514 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Srsf10Q9R0U0 262 aaKnown RBP13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Akap9Q70FJ1 3797 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 2410004P03RikA0A087WQY2 205 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm38303A0A0A6YWW8 100 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm4131A0A140LJ24 318 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr373E9Q4J3 314 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm8229K7N749 213 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Sstr5O08858 362 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Hsd17b12O70503 312 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 PlatP11214 559 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Pou3f2P31360 445 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Fkbp2P45878 140 aaKnown RBP13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Fbxw22Q5XG67 466 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Ifngr2Q63953 332 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 IppkQ6P1C1 489 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr372Q7TRY2 314 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Csnk1a1Q8BK63 337 aaKnown RBP13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 C1saQ8CG14 688 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tma7Q8K003 64 aaKnown RBP13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr99Q8VFE4 305 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Scgb3a1Q920D7 104 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Eif1bQ9CXU9 113 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Pmepa1Q9D7R2 260 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Ppp1r35Q9D8C8 260 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Asah1Q9WV54 394 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Hey1Q9WV93 299 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Col5a1O88207 1838 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr911-ps1A0A140T8K0 311 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Mllt6B1AR10 1109 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr288E9Q1P2 318 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 SgceO70258 437 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Ntf3P20181 258 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 S100a11P50543 98 aaKnown RBP13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tas2r123P59528 333 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Hes5P70120 167 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Amz2Q400C8 359 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Dpp10Q6NXK7 797 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Trim45Q6PFY8 580 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tas2r113Q7M711 309 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Zadh2Q8BGC4 377 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 SowahbQ8BZW2 760 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Chrnb4Q8R493 495 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Chmp1aQ921W0 196 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tspan2Q922J6 221 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Utp23Q9CX11 249 aaKnown RBP13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Sult1c2Q9D939 296 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Alyref2Q9JJW6 218 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Fam89bQ9QUI1 189 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Cldn14Q9Z0S3 239 aa13.09□□□□□ -0.31
Nup88-202ENSMUST00000108530 Dgat2l6A2ADU8 337 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Prr32A2AFE9 284 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Skint2A7XUX6 400 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Zfp456B2RUK9 458 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Ccdc74aE9Q9U8 364 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm9772F6XPD8 135 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 St3gal3P97325 374 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Dus4lQ32M08 324 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Ceacam19Q3TQ88 271 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Nkain3Q3URJ8 181 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Cryzl1Q921W4 348 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 WacQ924H7 646 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Il24Q925S4 181 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Acp1Q9D358 158 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Cryba2Q9JJV1 197 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 FancmQ8BGE5 2021 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rpl7a-ps5A0A140T8L3 268 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm42372A0A1B0GT27 204 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1029A2ATE0 324 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Vmn1r58G3X9U3 310 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm20695H3BLK7 282 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Nfatc1O88942 717 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 54.1 ms