RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NAA16Q6N069 864 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-233ENST00000642021 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
PHGDH-233ENST00000642021 SCN11AQ9UI33 1791 aa16.24■□□□□ 0.19
PHGDH-233ENST00000642021 CHAF1AQ13111 956 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-233ENST00000642021 ZMYM1Q5SVZ6 1142 aa16.24■□□□□ 0.19
PHGDH-233ENST00000642021 GPHNQ9NQX3 736 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-233ENST00000642021 HELLSQ9NRZ9 838 aa16.24■□□□□ 0.19
PHGDH-233ENST00000642021 C1orf167Q5SNV9 1468 aa16.24■□□□□ 0.19
PHGDH-233ENST00000642021 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
PHGDH-233ENST00000642021 CABP4P57796 275 aa16.24■□□□□ 0.19
PHGDH-233ENST00000642021 ATP2B3Q16720 1220 aa16.24■□□□□ 0.19
PHGDH-233ENST00000642021 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-233ENST00000642021 DSCC1Q9BVC3 393 aa16.24■□□□□ 0.19
PHGDH-233ENST00000642021 CTIFO43310 598 aaKnown RBP16.23■□□□□ 0.19
PHGDH-233ENST00000642021 PDIA3P30101 505 aaKnown RBP16.23■□□□□ 0.19
PHGDH-233ENST00000642021 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
PHGDH-233ENST00000642021 ENGASEQ8NFI3 743 aa16.23■□□□□ 0.19
PHGDH-233ENST00000642021 BBXQ8WY36 941 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-233ENST00000642021 SALL1Q9NSC2 1324 aa16.23■□□□□ 0.19
PHGDH-233ENST00000642021 PUS3Q9BZE2 481 aaKnown RBP16.23■□□□□ 0.19
PHGDH-233ENST00000642021 PALLDQ8WX93 1383 aa16.23■□□□□ 0.19
PHGDH-233ENST00000642021 MAST3O60307 1309 aa16.23■□□□□ 0.19
PHGDH-233ENST00000642021 FDPSP14324 419 aaKnown RBP16.22■□□□□ 0.19
PHGDH-233ENST00000642021 PRDM4Q9UKN5 801 aa16.22■□□□□ 0.19
PHGDH-233ENST00000642021 M0R2C6 588 aa16.21■□□□□ 0.19
PHGDH-233ENST00000642021 CBX1P83916 185 aa16.21■□□□□ 0.19
PHGDH-233ENST00000642021 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
PHGDH-233ENST00000642021 A1BGP04217 495 aa16.21■□□□□ 0.19
PHGDH-233ENST00000642021 ANKRD7Q92527 254 aa16.21■□□□□ 0.19
PHGDH-233ENST00000642021 OSBP2Q969R2 916 aa16.21■□□□□ 0.19
PHGDH-233ENST00000642021 A0A1B0GUL7 405 aa16.21■□□□□ 0.18
PHGDH-233ENST00000642021 GOLGA6L19H0YKK7 550 aa16.21■□□□□ 0.18
PHGDH-233ENST00000642021 IFIT1P09914 478 aaKnown RBP16.21■□□□□ 0.18
PHGDH-233ENST00000642021 TNNT1P13805 278 aa16.21■□□□□ 0.18
PHGDH-233ENST00000642021 DHX40Q8IX18 779 aaKnown RBP16.21■□□□□ 0.18
PHGDH-233ENST00000642021 C19orf44Q9H6X5 657 aa16.21■□□□□ 0.18
PHGDH-233ENST00000642021 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
PHGDH-233ENST00000642021 CAVIN2O95810 425 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 IL15P40933 162 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-233ENST00000642021 ME1P48163 572 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 LRRC8AQ8IWT6 810 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 FBXW7Q969H0 707 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 CWC25Q9NXE8 425 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-233ENST00000642021 EYA2O00167 538 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 FOXP2O15409 715 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 NAA30Q147X3 362 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-233ENST00000642021 STX1AQ16623 288 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 SARM1Q6SZW1 724 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 SMAP1Q8IYB5 467 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-233ENST00000642021 PDCL2Q8N4E4 241 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 FSIP1Q8NA03 581 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
PHGDH-233ENST00000642021 AFDNP55196 1824 aaKnown RBP16.19■□□□□ 0.18
PHGDH-233ENST00000642021 USP27XA6NNY8 438 aa16.19■□□□□ 0.18
PHGDH-233ENST00000642021 CDC25BP30305 580 aa16.19■□□□□ 0.18
PHGDH-233ENST00000642021 FAM160A1Q05DH4 1040 aa16.19■□□□□ 0.18
PHGDH-233ENST00000642021 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
PHGDH-233ENST00000642021 ZNF274Q96GC6 653 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-233ENST00000642021 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
PHGDH-233ENST00000642021 CTAGE5O15320 804 aa16.19■□□□□ 0.18
PHGDH-233ENST00000642021 HAND2P61296 217 aa16.19■□□□□ 0.18
PHGDH-233ENST00000642021 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
PHGDH-233ENST00000642021 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
PHGDH-233ENST00000642021 SPDYE4A6NLX3 237 aa16.18■□□□□ 0.18
PHGDH-233ENST00000642021 KINO60870 393 aaKnown RBP16.18■□□□□ 0.18
PHGDH-233ENST00000642021 FKBP4Q02790 459 aaKnown RBP eCLIP16.18■□□□□ 0.18
PHGDH-233ENST00000642021 MRFAP1L1Q96HT8 127 aa16.18■□□□□ 0.18
PHGDH-233ENST00000642021 ZNF396Q96N95 335 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-233ENST00000642021 GJB4Q9NTQ9 266 aa16.18■□□□□ 0.18
PHGDH-233ENST00000642021 MST1RQ04912 1400 aa16.18■□□□□ 0.18
PHGDH-233ENST00000642021 LAMA4Q16363 1823 aa16.18■□□□□ 0.18
PHGDH-233ENST00000642021 A0A1B0GVL5 298 aa16.18■□□□□ 0.18
PHGDH-233ENST00000642021 NCBP1Q09161 790 aaKnown RBP16.18■□□□□ 0.18
PHGDH-233ENST00000642021 TPD52L1Q16890 204 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-233ENST00000642021 BECN2A8MW95 431 aa16.17■□□□□ 0.18
PHGDH-233ENST00000642021 U2AF2P26368 475 aaKnown RBP eCLIP16.17■□□□□ 0.184e-10■■□□□ 11.5
PHGDH-233ENST00000642021 RAB11FIP4Q86YS3 637 aa16.17■□□□□ 0.18
PHGDH-233ENST00000642021 DHX37Q8IY37 1157 aaKnown RBP16.17■□□□□ 0.18
PHGDH-233ENST00000642021 FMR1NBQ8N0W7 255 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-233ENST00000642021 ADORA1P30542 326 aa16.17■□□□□ 0.18
PHGDH-233ENST00000642021 FILIP1Q7Z7B0 1213 aa16.17■□□□□ 0.18
PHGDH-233ENST00000642021 POLR3DP05423 398 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-233ENST00000642021 ZSCAN20P17040 1043 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-233ENST00000642021 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
PHGDH-233ENST00000642021 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
PHGDH-233ENST00000642021 GLI3P10071 1580 aa16.16■□□□□ 0.18
PHGDH-233ENST00000642021 SMTNL1A8MU46 457 aa16.16■□□□□ 0.18
PHGDH-233ENST00000642021 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-233ENST00000642021 NDUFA8P51970 172 aa16.16■□□□□ 0.18
PHGDH-233ENST00000642021 AOPEPQ8N6M6 819 aa16.16■□□□□ 0.18
PHGDH-233ENST00000642021 CCDC85AQ96PX6 553 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-233ENST00000642021 EVCP57679 992 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 SCARF1Q14162 830 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 ATL3Q6DD88 541 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 ANO10Q9NW15 660 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 ALS2Q96Q42 1657 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 TMEM94Q12767 1356 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 FGAP02671 866 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 SKILP12757 684 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 626.9 ms