RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 MICALL2Q8IY33 904 aa21.66■■□□□ 1.06
PHGDH-227ENST00000641811 FTSJ3Q8IY81 847 aaKnown RBP21.66■■□□□ 1.06
PHGDH-227ENST00000641811 DZIP1LQ8IYY4 767 aaKnown RBP21.66■■□□□ 1.06
PHGDH-227ENST00000641811 YTHDC1Q96MU7 727 aaKnown RBP21.66■■□□□ 1.06
PHGDH-227ENST00000641811 ADARB2Q9NS39 739 aaKnown RBP21.66■■□□□ 1.06
PHGDH-227ENST00000641811 HDAC5Q9UQL6 1122 aa21.66■■□□□ 1.06
PHGDH-227ENST00000641811 ADAMTSL1Q8N6G6 1762 aa21.65■■□□□ 1.06
PHGDH-227ENST00000641811 MROH5Q6ZUA9 1318 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 USP17L3A6NCW0 530 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 USP17L4A6NCW7 530 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 METTL24Q5JXM2 366 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 MAP1SQ66K74 1059 aaPredicted RBP21.64■■□□□ 1.05
PHGDH-227ENST00000641811 C15orf52Q6ZUT6 534 aaKnown RBP21.64■■□□□ 1.05
PHGDH-227ENST00000641811 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.05
PHGDH-227ENST00000641811 USP17L1Q7RTZ2 530 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 TRPM4Q8TD43 1214 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 DPF2Q92785 391 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 FBXW7Q969H0 707 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 MXD3Q9BW11 206 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 RCAN3Q9UKA8 241 aa21.64■■□□□ 1.05
PHGDH-227ENST00000641811 RPS12P25398 132 aaKnown RBP21.63■■□□□ 1.05
PHGDH-227ENST00000641811 HIRAP54198 1017 aaPredicted RBP21.63■■□□□ 1.05
PHGDH-227ENST00000641811 HTRA3P83110 453 aa21.63■■□□□ 1.05
PHGDH-227ENST00000641811 RSBN1LQ6PCB5 846 aaPredicted RBP21.63■■□□□ 1.05
PHGDH-227ENST00000641811 PANK1Q8TE04 598 aa21.63■■□□□ 1.05
PHGDH-227ENST00000641811 SIL1Q9H173 461 aa21.63■■□□□ 1.05
PHGDH-227ENST00000641811 CD209Q9NNX6 404 aa21.63■■□□□ 1.05
PHGDH-227ENST00000641811 PA2G4Q9UQ80 394 aaKnown RBP21.63■■□□□ 1.05
PHGDH-227ENST00000641811 H7C1D1 291 aa21.62■■□□□ 1.05
PHGDH-227ENST00000641811 EYA2O00167 538 aa21.62■■□□□ 1.05
PHGDH-227ENST00000641811 UBE4AQ14139 1066 aa21.62■■□□□ 1.05
PHGDH-227ENST00000641811 ATG9AQ7Z3C6 839 aa21.62■■□□□ 1.05
PHGDH-227ENST00000641811 SAMD7Q7Z3H4 446 aa21.62■■□□□ 1.05
PHGDH-227ENST00000641811 ITPRIPQ8IWB1 547 aa21.62■■□□□ 1.05
PHGDH-227ENST00000641811 VGLL2Q8N8G2 317 aa21.62■■□□□ 1.05
PHGDH-227ENST00000641811 ITGBL1O95965 494 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-227ENST00000641811 EGFRP00533 1210 aa21.61■■□□□ 1.05
PHGDH-227ENST00000641811 GNAI2P04899 355 aa21.61■■□□□ 1.05
PHGDH-227ENST00000641811 APLP1P51693 650 aa21.61■■□□□ 1.05
PHGDH-227ENST00000641811 TBC1D10BQ4KMP7 808 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-227ENST00000641811 DACT2Q5SW24 774 aa21.61■■□□□ 1.05
PHGDH-227ENST00000641811 GMLQ99445 158 aa21.61■■□□□ 1.05
PHGDH-227ENST00000641811 PSME4Q14997 1843 aa21.6■■□□□ 1.05
PHGDH-227ENST00000641811 SRGAP3O43295 1099 aa21.6■■□□□ 1.05
PHGDH-227ENST00000641811 PDE8BO95263 885 aa21.6■■□□□ 1.05
PHGDH-227ENST00000641811 GYG1P46976 350 aa21.6■■□□□ 1.05
PHGDH-227ENST00000641811 GTF2IP78347 998 aa21.6■■□□□ 1.05
PHGDH-227ENST00000641811 RBM26Q5T8P6 1007 aaKnown RBP21.6■■□□□ 1.05
PHGDH-227ENST00000641811 ZNF804AQ7Z570 1209 aa21.6■■□□□ 1.05
PHGDH-227ENST00000641811 CNTROBQ8N137 903 aa21.6■■□□□ 1.05
PHGDH-227ENST00000641811 AGBL3Q8NEM8 1001 aa21.6■■□□□ 1.05
PHGDH-227ENST00000641811 CEP350Q5VT06 3117 aa21.59■■□□□ 1.05
PHGDH-227ENST00000641811 STRIP1Q5VSL9 837 aa21.59■■□□□ 1.05
PHGDH-227ENST00000641811 TTLL5Q6EMB2 1281 aa21.59■■□□□ 1.05
PHGDH-227ENST00000641811 ZNF646O15015 1829 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-227ENST00000641811 ZBTB7BO15156 539 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-227ENST00000641811 IL1R1P14778 569 aa21.58■■□□□ 1.05
PHGDH-227ENST00000641811 MTX1Q13505 466 aa21.58■■□□□ 1.05
PHGDH-227ENST00000641811 FAM84BQ96KN1 310 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-227ENST00000641811 C1orf115Q9H7X2 142 aa21.58■■□□□ 1.05
PHGDH-227ENST00000641811 PNMA6EA0A0J9YXQ4 647 aa21.57■■□□□ 1.04
PHGDH-227ENST00000641811 FMR1Q06787 632 aaKnown RBP eCLIP21.57■■□□□ 1.043e-7■■■□□ 15
PHGDH-227ENST00000641811 COPRSQ9NQ92 184 aa21.57■■□□□ 1.04
PHGDH-227ENST00000641811 JAG2Q9Y219 1238 aa21.57■■□□□ 1.04
PHGDH-227ENST00000641811 PASKQ96RG2 1323 aa21.56■■□□□ 1.04
PHGDH-227ENST00000641811 ZNF609O15014 1411 aa21.56■■□□□ 1.04
PHGDH-227ENST00000641811 CIAO1O76071 339 aa21.56■■□□□ 1.04
PHGDH-227ENST00000641811 USP17L8P0C7I0 530 aa21.56■■□□□ 1.04
PHGDH-227ENST00000641811 HIBADHP31937 336 aaKnown RBP21.56■■□□□ 1.04
PHGDH-227ENST00000641811 ZNF280AP59817 542 aaPredicted RBP21.56■■□□□ 1.04
PHGDH-227ENST00000641811 FGFR2P21802 821 aa21.55■■□□□ 1.04
PHGDH-227ENST00000641811 PUM3Q15397 648 aaKnown RBP21.55■■□□□ 1.04
PHGDH-227ENST00000641811 KIF4BQ2VIQ3 1234 aa21.55■■□□□ 1.04
PHGDH-227ENST00000641811 PGAP2Q9UHJ9 254 aa21.55■■□□□ 1.04
PHGDH-227ENST00000641811 FBXO3Q9UK99 471 aa21.55■■□□□ 1.04
PHGDH-227ENST00000641811 TRAF5O00463 557 aa21.54■■□□□ 1.04
PHGDH-227ENST00000641811 IL15P40933 162 aaPredicted RBP21.54■■□□□ 1.04
PHGDH-227ENST00000641811 FBXO33Q7Z6M2 555 aa21.54■■□□□ 1.04
PHGDH-227ENST00000641811 CERS5Q8N5B7 392 aa21.54■■□□□ 1.04
PHGDH-227ENST00000641811 TDRD7Q8NHU6 1098 aaKnown RBP21.54■■□□□ 1.04
PHGDH-227ENST00000641811 CEP126Q9P2H0 1117 aa21.54■■□□□ 1.04
PHGDH-227ENST00000641811 IQSEC3Q9UPP2 1182 aaPredicted RBP21.54■■□□□ 1.04
PHGDH-227ENST00000641811 ASTN2O75129 1339 aaPredicted RBP21.54■■□□□ 1.04
PHGDH-227ENST00000641811 MS4A1P11836 297 aa21.53■■□□□ 1.04
PHGDH-227ENST00000641811 BCAMP50895 628 aa21.53■■□□□ 1.04
PHGDH-227ENST00000641811 KIAA0825Q8IV33 1275 aa21.53■■□□□ 1.04
PHGDH-227ENST00000641811 ZC3H15Q8WU90 426 aaKnown RBP21.53■■□□□ 1.04
PHGDH-227ENST00000641811 GLIS2Q9BZE0 524 aaPredicted RBP21.53■■□□□ 1.04
PHGDH-227ENST00000641811 COG6Q9Y2V7 657 aa21.53■■□□□ 1.04
PHGDH-227ENST00000641811 MYO3BQ8WXR4 1341 aa21.53■■□□□ 1.04
PHGDH-227ENST00000641811 SASH1O94885 1247 aa21.52■■□□□ 1.04
PHGDH-227ENST00000641811 IFIT1P09914 478 aaKnown RBP21.52■■□□□ 1.04
PHGDH-227ENST00000641811 C20orf194Q5TEA3 1177 aa21.52■■□□□ 1.04
PHGDH-227ENST00000641811 VPS37DQ86XT2 251 aa21.52■■□□□ 1.04
PHGDH-227ENST00000641811 DNAJC5GQ8N7S2 189 aa21.52■■□□□ 1.04
PHGDH-227ENST00000641811 MYOZ2Q9NPC6 264 aa21.52■■□□□ 1.04
PHGDH-227ENST00000641811 SLC5A1P13866 664 aa21.51■■□□□ 1.03
PHGDH-227ENST00000641811 ATP8B2P98198 1209 aa21.51■■□□□ 1.03
PHGDH-227ENST00000641811 ATP2B3Q16720 1220 aa21.51■■□□□ 1.03
PHGDH-227ENST00000641811 CAVIN4Q5BKX8 364 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms