RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 COL13A1Q5TAT6 717 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-218ENST00000641491 TAOK3Q9H2K8 898 aa15.85■□□□□ 0.13
PHGDH-218ENST00000641491 PODXL2Q9NZ53 605 aa15.85■□□□□ 0.13
PHGDH-218ENST00000641491 KDM2BQ8NHM5 1336 aa15.85■□□□□ 0.13
PHGDH-218ENST00000641491 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
PHGDH-218ENST00000641491 KCNA3P22001 575 aa15.84■□□□□ 0.13
PHGDH-218ENST00000641491 WASHC4Q2M389 1173 aa15.84■□□□□ 0.13
PHGDH-218ENST00000641491 CCDC8Q9H0W5 538 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-218ENST00000641491 ZNF609O15014 1411 aa15.84■□□□□ 0.13
PHGDH-218ENST00000641491 MX1P20591 662 aa15.83■□□□□ 0.12
PHGDH-218ENST00000641491 FKBP4Q02790 459 aaKnown RBP eCLIP15.83■□□□□ 0.12
PHGDH-218ENST00000641491 ARHGAP27Q6ZUM4 889 aa15.83■□□□□ 0.12
PHGDH-218ENST00000641491 JMYQ8N9B5 988 aa15.83■□□□□ 0.12
PHGDH-218ENST00000641491 TBC1D16Q8TBP0 767 aa15.83■□□□□ 0.12
PHGDH-218ENST00000641491 RIMBP2O15034 1052 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 PPIP5K2O43314 1243 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 UQCRFS1P1P0C7P4 283 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 RGS3P49796 1198 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 JDP2Q8WYK2 163 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 FBXW7Q969H0 707 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 XAGE2Q96GT9 111 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 PSMD1Q99460 953 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 DLEC1Q9Y238 1755 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 SPEF2Q9C093 1822 aa15.82■□□□□ 0.12
PHGDH-218ENST00000641491 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
PHGDH-218ENST00000641491 TIMM10P62072 90 aa15.81■□□□□ 0.12
PHGDH-218ENST00000641491 LARGE2Q8N3Y3 721 aa15.81■□□□□ 0.12
PHGDH-218ENST00000641491 VGLL2Q8N8G2 317 aa15.81■□□□□ 0.12
PHGDH-218ENST00000641491 KLRG1Q96E93 195 aa15.81■□□□□ 0.12
PHGDH-218ENST00000641491 ECHDC1Q9NTX5 307 aa15.81■□□□□ 0.12
PHGDH-218ENST00000641491 MED23Q9ULK4 1368 aa15.81■□□□□ 0.12
PHGDH-218ENST00000641491 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
PHGDH-218ENST00000641491 OLFM4Q6UX06 510 aa15.8■□□□□ 0.12
PHGDH-218ENST00000641491 NIM1KQ8IY84 436 aa15.8■□□□□ 0.12
PHGDH-218ENST00000641491 RBM46Q8TBY0 533 aaKnown RBP15.8■□□□□ 0.12
PHGDH-218ENST00000641491 EAF2Q96CJ1 260 aaPredicted RBP15.8■□□□□ 0.12
PHGDH-218ENST00000641491 DBNDD2Q9BQY9 259 aa15.8■□□□□ 0.12
PHGDH-218ENST00000641491 VPS33BQ9H267 617 aa15.8■□□□□ 0.12
PHGDH-218ENST00000641491 GLRX3O76003 335 aaKnown RBP15.79■□□□□ 0.12
PHGDH-218ENST00000641491 PRELPP51888 382 aa15.79■□□□□ 0.12
PHGDH-218ENST00000641491 COA1Q9GZY4 146 aa15.79■□□□□ 0.12
PHGDH-218ENST00000641491 POLLQ9UGP5 575 aa15.79■□□□□ 0.12
PHGDH-218ENST00000641491 CAPN15O75808 1086 aa15.78■□□□□ 0.12
PHGDH-218ENST00000641491 FGFR2P21802 821 aa15.78■□□□□ 0.12
PHGDH-218ENST00000641491 GYG1P46976 350 aa15.78■□□□□ 0.12
PHGDH-218ENST00000641491 AOC3Q16853 763 aa15.78■□□□□ 0.12
PHGDH-218ENST00000641491 LRRFIP1Q32MZ4 808 aaKnown RBP15.78■□□□□ 0.12
PHGDH-218ENST00000641491 TNS4Q8IZW8 715 aa15.78■□□□□ 0.12
PHGDH-218ENST00000641491 C7orf43Q8WVR3 580 aa15.78■□□□□ 0.12
PHGDH-218ENST00000641491 DNAJC2Q99543 621 aaKnown RBP15.78■□□□□ 0.12
PHGDH-218ENST00000641491 NMRK2Q9NPI5 230 aa15.78■□□□□ 0.12
PHGDH-218ENST00000641491 ZNF277Q9NRM2 450 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-218ENST00000641491 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
PHGDH-218ENST00000641491 DENND2AQ9ULE3 1009 aa15.78■□□□□ 0.12
PHGDH-218ENST00000641491 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
PHGDH-218ENST00000641491 AOX1Q06278 1338 aa15.77■□□□□ 0.12
PHGDH-218ENST00000641491 TRIM6-TRIM34B2RNG4 842 aa15.77■□□□□ 0.12
PHGDH-218ENST00000641491 SEMA3EO15041 775 aa15.77■□□□□ 0.12
PHGDH-218ENST00000641491 ADORA1P30542 326 aa15.77■□□□□ 0.12
PHGDH-218ENST00000641491 IARSP41252 1262 aaKnown RBP15.77■□□□□ 0.12
PHGDH-218ENST00000641491 CCDC102BQ68D86 513 aa15.77■□□□□ 0.12
PHGDH-218ENST00000641491 GPR101Q96P66 508 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-218ENST00000641491 RTFDC1Q9BY42 306 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-218ENST00000641491 TLR7Q9NYK1 1049 aaKnown RBP15.77■□□□□ 0.12
PHGDH-218ENST00000641491 SLX4Q8IY92 1834 aa15.76■□□□□ 0.11
PHGDH-218ENST00000641491 SNAP23O00161 211 aa15.76■□□□□ 0.11
PHGDH-218ENST00000641491 BCAMP50895 628 aa15.76■□□□□ 0.11
PHGDH-218ENST00000641491 HTRA3P83110 453 aa15.76■□□□□ 0.11
PHGDH-218ENST00000641491 KIAA2012Q0VF49 1180 aa15.76■□□□□ 0.11
PHGDH-218ENST00000641491 FSTL1Q12841 308 aa15.76■□□□□ 0.11
PHGDH-218ENST00000641491 CHAF1AQ13111 956 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-218ENST00000641491 C15orf52Q6ZUT6 534 aaKnown RBP15.76■□□□□ 0.11
PHGDH-218ENST00000641491 ZGPATQ8N5A5 531 aaKnown RBP15.76■□□□□ 0.11
PHGDH-218ENST00000641491 LRRC37AA6NMS7 1700 aa15.76■□□□□ 0.11
PHGDH-218ENST00000641491 LTBP3Q9NS15 1303 aa15.75■□□□□ 0.11
PHGDH-218ENST00000641491 ECE2O60344 883 aa15.75■□□□□ 0.11
PHGDH-218ENST00000641491 PDE1AP54750 535 aa15.75■□□□□ 0.11
PHGDH-218ENST00000641491 RASSF7Q02833 373 aa15.75■□□□□ 0.11
PHGDH-218ENST00000641491 TTF1Q15361 905 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-218ENST00000641491 DOK7Q18PE1 504 aa15.75■□□□□ 0.11
PHGDH-218ENST00000641491 CASC1Q6TDU7 716 aa15.75■□□□□ 0.11
PHGDH-218ENST00000641491 C16orf71Q8IYS4 520 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-218ENST00000641491 CNTROBQ8N137 903 aa15.75■□□□□ 0.11
PHGDH-218ENST00000641491 TAF1P21675 1872 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 COL4A1P02462 1669 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 ATP5JP18859 108 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 LMNB1P20700 586 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 PHKA1P46020 1223 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 EIF6P56537 245 aaKnown RBP15.74■□□□□ 0.11
PHGDH-218ENST00000641491 PODNQ7Z5L7 613 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.74■□□□□ 0.11
PHGDH-218ENST00000641491 FAM84BQ96KN1 310 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-218ENST00000641491 BOLA2Q9H3K6 86 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 DBNDD1Q9H9R9 158 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 IQSEC3Q9UPP2 1182 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-218ENST00000641491 WDR90Q96KV7 1748 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
PHGDH-218ENST00000641491 KLRK1P26718 216 aa15.73■□□□□ 0.11
PHGDH-218ENST00000641491 ARID4AP29374 1257 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-218ENST00000641491 TSHZ3Q63HK5 1081 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms