RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ITGA6P23229 1130 aa21.35■■□□□ 1.01
PHGDH-213ENST00000641272 IGHMBP2P38935 993 aaKnown RBP21.35■■□□□ 1.01
PHGDH-213ENST00000641272 ZNF280AP59817 542 aaPredicted RBP21.35■■□□□ 1.01
PHGDH-213ENST00000641272 EXOSC9Q06265 439 aaKnown RBP21.35■■□□□ 1.01
PHGDH-213ENST00000641272 NOGQ13253 232 aa21.35■■□□□ 1.01
PHGDH-213ENST00000641272 SCARF1Q14162 830 aa21.35■■□□□ 1.01
PHGDH-213ENST00000641272 RGMBQ6NW40 437 aa21.35■■□□□ 1.01
PHGDH-213ENST00000641272 USP17L1Q7RTZ2 530 aa21.35■■□□□ 1.01
PHGDH-213ENST00000641272 C2orf69Q8N8R5 385 aa21.35■■□□□ 1.01
PHGDH-213ENST00000641272 MYOZ2Q9NPC6 264 aa21.35■■□□□ 1.01
PHGDH-213ENST00000641272 PAPPA2Q9BXP8 1791 aa21.35■■□□□ 1.01
PHGDH-213ENST00000641272 USP17L8P0C7I0 530 aa21.34■■□□□ 1.01
PHGDH-213ENST00000641272 CASP7P55210 303 aa21.34■■□□□ 1.01
PHGDH-213ENST00000641272 TXNRD3Q86VQ6 643 aa21.34■■□□□ 1.01
PHGDH-213ENST00000641272 GMLQ99445 158 aa21.34■■□□□ 1.01
PHGDH-213ENST00000641272 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
PHGDH-213ENST00000641272 F6X3S4 739 aa21.33■■□□□ 1.01
PHGDH-213ENST00000641272 PODNQ7Z5L7 613 aa21.33■■□□□ 1.01
PHGDH-213ENST00000641272 SPINK5Q9NQ38 1064 aaPredicted RBP21.33■■□□□ 1.01
PHGDH-213ENST00000641272 FAM155AB1AL88 458 aaPredicted RBP21.32■■□□□ 1
PHGDH-213ENST00000641272 ZNF157P51786 506 aaPredicted RBP21.32■■□□□ 1
PHGDH-213ENST00000641272 LINS1Q8NG48 757 aa21.32■■□□□ 1
PHGDH-213ENST00000641272 CA12O43570 354 aa21.31■■□□□ 1
PHGDH-213ENST00000641272 VAMP4O75379 141 aa21.31■■□□□ 1
PHGDH-213ENST00000641272 DACT2Q5SW24 774 aa21.31■■□□□ 1
PHGDH-213ENST00000641272 PLA2G12BQ9BX93 195 aa21.31■■□□□ 1
PHGDH-213ENST00000641272 CHMP3Q9Y3E7 222 aa21.31■■□□□ 1
PHGDH-213ENST00000641272 AKAP11Q9UKA4 1901 aa21.3■■□□□ 1
PHGDH-213ENST00000641272 ZNF316A6NFI3 1004 aaPredicted RBP21.3■■□□□ 1
PHGDH-213ENST00000641272 SASH1O94885 1247 aa21.3■■□□□ 1
PHGDH-213ENST00000641272 MPHOSPH8Q99549 860 aa21.3■■□□□ 1
PHGDH-213ENST00000641272 ZNF804BA4D1E1 1349 aa21.29■■□□□ 1
PHGDH-213ENST00000641272 SNAP23O00161 211 aa21.29■■□□□ 1
PHGDH-213ENST00000641272 KCNJ4P48050 445 aa21.29■■□□□ 1
PHGDH-213ENST00000641272 KIF23Q02241 960 aaPredicted RBP21.29■■□□□ 1
PHGDH-213ENST00000641272 NBPF9Q3BBW0 867 aa21.29■■□□□ 1
PHGDH-213ENST00000641272 PRAMEF18Q5VWM3 479 aa21.29■■□□□ 1
PHGDH-213ENST00000641272 MOB2Q70IA6 237 aa21.29■■□□□ 1
PHGDH-213ENST00000641272 WDR63Q8IWG1 891 aa21.29■■□□□ 1
PHGDH-213ENST00000641272 FAM9BQ8IZU0 186 aa21.29■■□□□ 1
PHGDH-213ENST00000641272 COA1Q9GZY4 146 aa21.29■■□□□ 1
PHGDH-213ENST00000641272 CCDC85CA6NKD9 419 aa21.28■■□□□ 1
PHGDH-213ENST00000641272 SLC10A3P09131 477 aa21.28■■□□□ 1
PHGDH-213ENST00000641272 CHRNDQ07001 517 aa21.28■■□□□ 1
PHGDH-213ENST00000641272 LEMD3Q9Y2U8 911 aa21.28■■□□□ 1
PHGDH-213ENST00000641272 CSF1RP07333 972 aa21.27■■□□□ 1
PHGDH-213ENST00000641272 NCBP3Q53F19 620 aaKnown RBP21.27■■□□□ 1
PHGDH-213ENST00000641272 RASAL3Q86YV0 1011 aa21.27■■□□□ 1
PHGDH-213ENST00000641272 HELBQ8NG08 1087 aaPredicted RBP21.27■■□□□ 1
PHGDH-213ENST00000641272 MCOLN1Q9GZU1 580 aa21.27■■□□□ 1
PHGDH-213ENST00000641272 ANKRD2Q9GZV1 360 aa21.27■■□□□ 1
PHGDH-213ENST00000641272 PITPNM2Q9BZ72 1349 aa21.27■□□□□ 0.99
PHGDH-213ENST00000641272 ANKRD18BA2A2Z9 1011 aa21.26■□□□□ 0.99
PHGDH-213ENST00000641272 TAF5LO75529 589 aa21.26■□□□□ 0.99
PHGDH-213ENST00000641272 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
PHGDH-213ENST00000641272 STRIP1Q5VSL9 837 aa21.26■□□□□ 0.99
PHGDH-213ENST00000641272 KIAA0825Q8IV33 1275 aa21.26■□□□□ 0.99
PHGDH-213ENST00000641272 CCDC102AQ96A19 550 aa21.26■□□□□ 0.99
PHGDH-213ENST00000641272 MYO3BQ8WXR4 1341 aa21.26■□□□□ 0.99
PHGDH-213ENST00000641272 GTF2IP78347 998 aa21.25■□□□□ 0.99
PHGDH-213ENST00000641272 FOXO4P98177 505 aa21.25■□□□□ 0.99
PHGDH-213ENST00000641272 BEND3Q5T5X7 828 aa21.25■□□□□ 0.99
PHGDH-213ENST00000641272 WNT10BO00744 389 aa21.24■□□□□ 0.99
PHGDH-213ENST00000641272 DGKZQ13574 1117 aa21.24■□□□□ 0.99
PHGDH-213ENST00000641272 EPHA10Q5JZY3 1008 aa21.24■□□□□ 0.99
PHGDH-213ENST00000641272 OGFOD1Q8N543 542 aa21.24■□□□□ 0.99
PHGDH-213ENST00000641272 ECM29Q5VYK3 1845 aa21.24■□□□□ 0.99
PHGDH-213ENST00000641272 TRPA1O75762 1119 aa21.23■□□□□ 0.99
PHGDH-213ENST00000641272 IFIT5Q13325 482 aaKnown RBP21.23■□□□□ 0.99
PHGDH-213ENST00000641272 TTLL12Q14166 644 aaPredicted RBP21.23■□□□□ 0.99
PHGDH-213ENST00000641272 TTLL5Q6EMB2 1281 aa21.23■□□□□ 0.99
PHGDH-213ENST00000641272 ZNF594Q96JF6 807 aaPredicted RBP21.23■□□□□ 0.99
PHGDH-213ENST00000641272 JAG2Q9Y219 1238 aa21.23■□□□□ 0.99
PHGDH-213ENST00000641272 UBE2Q2LH0YL09 131 aa21.22■□□□□ 0.99
PHGDH-213ENST00000641272 SLC4A10Q6U841 1118 aa21.22■□□□□ 0.99
PHGDH-213ENST00000641272 LMBR1LQ6UX01 489 aa21.22■□□□□ 0.99
PHGDH-213ENST00000641272 PRKG1Q13976 671 aa21.21■□□□□ 0.99
PHGDH-213ENST00000641272 TAF7LQ5H9L4 462 aa21.21■□□□□ 0.99
PHGDH-213ENST00000641272 CD209Q9NNX6 404 aa21.21■□□□□ 0.99
PHGDH-213ENST00000641272 RNF186Q9NXI6 227 aa21.21■□□□□ 0.99
PHGDH-213ENST00000641272 IRS2Q9Y4H2 1338 aa21.21■□□□□ 0.99
PHGDH-213ENST00000641272 F8W031 263 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-213ENST00000641272 GRM8O00222 908 aa21.2■□□□□ 0.98
PHGDH-213ENST00000641272 PLIN1O60240 522 aa21.2■□□□□ 0.98
PHGDH-213ENST00000641272 FKBP1BP68106 108 aa21.2■□□□□ 0.98
PHGDH-213ENST00000641272 MKRN3Q13064 507 aaKnown RBP21.2■□□□□ 0.98
PHGDH-213ENST00000641272 CERS5Q8N5B7 392 aa21.2■□□□□ 0.98
PHGDH-213ENST00000641272 CSRNP1Q96S65 589 aa21.2■□□□□ 0.98
PHGDH-213ENST00000641272 SAGE1Q9NXZ1 904 aa21.2■□□□□ 0.98
PHGDH-213ENST00000641272 ARAP2Q8WZ64 1704 aa21.2■□□□□ 0.98
PHGDH-213ENST00000641272 HDAC9Q9UKV0 1011 aa21.19■□□□□ 0.98
PHGDH-213ENST00000641272 PCDHAC2Q9Y5I4 1007 aa21.19■□□□□ 0.98
PHGDH-213ENST00000641272 CCDC57Q2TAC2 916 aa21.18■□□□□ 0.98
PHGDH-213ENST00000641272 C9orf78Q9NZ63 289 aaPredicted RBP21.18■□□□□ 0.98
PHGDH-213ENST00000641272 FZD1Q9UP38 647 aa21.18■□□□□ 0.98
PHGDH-213ENST00000641272 NF2P35240 595 aa21.17■□□□□ 0.98
PHGDH-213ENST00000641272 ZNF804AQ7Z570 1209 aa21.17■□□□□ 0.98
PHGDH-213ENST00000641272 APOBEC3FQ8IUX4 373 aaKnown RBP21.17■□□□□ 0.98
PHGDH-213ENST00000641272 SUCLG2Q96I99 432 aa21.17■□□□□ 0.98
PHGDH-213ENST00000641272 SRCIN1Q9C0H9 1055 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms