RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ZNF541Q9H0D2 1346 aa16.33■□□□□ 0.2
GTF3A-209ENST00000640289 G3V3G9 751 aa16.32■□□□□ 0.2
GTF3A-209ENST00000640289 GYG1P46976 350 aa16.32■□□□□ 0.2
GTF3A-209ENST00000640289 TIMM10P62072 90 aa16.32■□□□□ 0.2
GTF3A-209ENST00000640289 DCAF8Q5TAQ9 597 aa16.32■□□□□ 0.2
GTF3A-209ENST00000640289 LPIN2Q92539 896 aa16.32■□□□□ 0.2
GTF3A-209ENST00000640289 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
GTF3A-209ENST00000640289 ZNRF3Q9ULT6 936 aa16.32■□□□□ 0.2
GTF3A-209ENST00000640289 TIAM2Q8IVF5 1701 aa16.31■□□□□ 0.2
GTF3A-209ENST00000640289 IFIT1P09914 478 aaKnown RBP16.31■□□□□ 0.2
GTF3A-209ENST00000640289 SLC5A1P13866 664 aa16.31■□□□□ 0.2
GTF3A-209ENST00000640289 ADORA1P30542 326 aa16.31■□□□□ 0.2
GTF3A-209ENST00000640289 RHPN1Q8TCX5 695 aa16.31■□□□□ 0.2
GTF3A-209ENST00000640289 FAM84BQ96KN1 310 aaPredicted RBP16.31■□□□□ 0.2
GTF3A-209ENST00000640289 ZNF609O15014 1411 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 A0A1B0GUL7 405 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 RAD17O75943 681 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 YY1P25490 414 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 BCAMP50895 628 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 ZNF804AQ7Z570 1209 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 COA1Q9GZY4 146 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 DCTPP1Q9H773 170 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 CD209Q9NNX6 404 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 IL1RAPL2Q9NP60 686 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 AKAP2Q9Y2D5 859 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 CCDC88AQ3V6T2 1871 aa16.3■□□□□ 0.2
GTF3A-209ENST00000640289 ZC3H4Q9UPT8 1303 aaKnown RBP16.29■□□□□ 0.2
GTF3A-209ENST00000640289 HIBADHP31937 336 aaKnown RBP16.29■□□□□ 0.2
GTF3A-209ENST00000640289 EIF6P56537 245 aaKnown RBP16.29■□□□□ 0.2
GTF3A-209ENST00000640289 CXCL9Q07325 125 aa16.29■□□□□ 0.2
GTF3A-209ENST00000640289 TNNI3KQ59H18 835 aa16.29■□□□□ 0.2
GTF3A-209ENST00000640289 PODNQ7Z5L7 613 aa16.29■□□□□ 0.2
GTF3A-209ENST00000640289 FBXO33Q7Z6M2 555 aa16.29■□□□□ 0.2
GTF3A-209ENST00000640289 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
GTF3A-209ENST00000640289 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
GTF3A-209ENST00000640289 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
GTF3A-209ENST00000640289 FPGT-TNNI3KV9GXZ4 949 aa16.29■□□□□ 0.2
GTF3A-209ENST00000640289 CHD4Q14839 1912 aa16.28■□□□□ 0.2
GTF3A-209ENST00000640289 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
GTF3A-209ENST00000640289 DDNO94850 711 aaPredicted RBP16.28■□□□□ 0.2
GTF3A-209ENST00000640289 IGHDP01880 384 aa16.28■□□□□ 0.2
GTF3A-209ENST00000640289 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
GTF3A-209ENST00000640289 CAVIN4Q5BKX8 364 aa16.28■□□□□ 0.2
GTF3A-209ENST00000640289 ZNF526Q8TF50 670 aaPredicted RBP16.28■□□□□ 0.2
GTF3A-209ENST00000640289 EAF2Q96CJ1 260 aaPredicted RBP16.28■□□□□ 0.2
GTF3A-209ENST00000640289 KIF1BPQ96EK5 621 aa16.28■□□□□ 0.2
GTF3A-209ENST00000640289 XAGE2Q96GT9 111 aa16.28■□□□□ 0.2
GTF3A-209ENST00000640289 GPR108Q9NPR9 543 aa16.28■□□□□ 0.2
GTF3A-209ENST00000640289 IQSEC3Q9UPP2 1182 aaPredicted RBP16.28■□□□□ 0.2
GTF3A-209ENST00000640289 DICER1Q9UPY3 1922 aaKnown RBP16.27■□□□□ 0.2
GTF3A-209ENST00000640289 GLTPD2A6NH11 291 aa16.27■□□□□ 0.2
GTF3A-209ENST00000640289 PSMD14O00487 310 aa16.27■□□□□ 0.2
GTF3A-209ENST00000640289 SMARCA5O60264 1052 aaPredicted RBP16.27■□□□□ 0.2
GTF3A-209ENST00000640289 IL1R1P14778 569 aa16.27■□□□□ 0.2
GTF3A-209ENST00000640289 CIAPIN1Q6FI81 312 aa16.27■□□□□ 0.2
GTF3A-209ENST00000640289 VPS37DQ86XT2 251 aa16.27■□□□□ 0.2
GTF3A-209ENST00000640289 FBXW7Q969H0 707 aa16.27■□□□□ 0.2
GTF3A-209ENST00000640289 CCDC8Q9H0W5 538 aaPredicted RBP16.27■□□□□ 0.2
GTF3A-209ENST00000640289 TLR7Q9NYK1 1049 aaKnown RBP16.27■□□□□ 0.2
GTF3A-209ENST00000640289 JAG2Q9Y219 1238 aa16.27■□□□□ 0.2
GTF3A-209ENST00000640289 GJA3Q9Y6H8 435 aa16.27■□□□□ 0.2
GTF3A-209ENST00000640289 NEFLP07196 543 aa16.26■□□□□ 0.19
GTF3A-209ENST00000640289 PHKA1P46020 1223 aa16.26■□□□□ 0.19
GTF3A-209ENST00000640289 DPY19L2Q6NUT2 758 aa16.26■□□□□ 0.19
GTF3A-209ENST00000640289 TDRD7Q8NHU6 1098 aaKnown RBP16.26■□□□□ 0.19
GTF3A-209ENST00000640289 DBNDD2Q9BQY9 259 aa16.26■□□□□ 0.19
GTF3A-209ENST00000640289 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
GTF3A-209ENST00000640289 RWDD1Q9H446 243 aaPredicted RBP16.26■□□□□ 0.19
GTF3A-209ENST00000640289 GTF2IP78347 998 aa16.25■□□□□ 0.19
GTF3A-209ENST00000640289 CCDC102BQ68D86 513 aa16.25■□□□□ 0.19
GTF3A-209ENST00000640289 AACSQ86V21 672 aa16.25■□□□□ 0.19
GTF3A-209ENST00000640289 GPC2Q8N158 579 aa16.25■□□□□ 0.19
GTF3A-209ENST00000640289 MXD3Q9BW11 206 aa16.25■□□□□ 0.19
GTF3A-209ENST00000640289 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
GTF3A-209ENST00000640289 USP17L3A6NCW0 530 aa16.24■□□□□ 0.19
GTF3A-209ENST00000640289 USP17L4A6NCW7 530 aa16.24■□□□□ 0.19
GTF3A-209ENST00000640289 TNIP1Q15025 636 aa16.24■□□□□ 0.19
GTF3A-209ENST00000640289 USP17L1Q7RTZ2 530 aa16.24■□□□□ 0.19
GTF3A-209ENST00000640289 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
GTF3A-209ENST00000640289 DBNLQ9UJU6 430 aaKnown RBP16.24■□□□□ 0.19
GTF3A-209ENST00000640289 FRAT2O75474 233 aaPredicted RBP16.23■□□□□ 0.19
GTF3A-209ENST00000640289 VIL1P09327 827 aaKnown RBP16.23■□□□□ 0.19
GTF3A-209ENST00000640289 CHAF1AQ13111 956 aaPredicted RBP16.23■□□□□ 0.19
GTF3A-209ENST00000640289 DACT2Q5SW24 774 aa16.23■□□□□ 0.19
GTF3A-209ENST00000640289 GORABQ5T7V8 394 aa16.23■□□□□ 0.19
GTF3A-209ENST00000640289 TTLL5Q6EMB2 1281 aa16.23■□□□□ 0.19
GTF3A-209ENST00000640289 GCC1Q96CN9 775 aa16.23■□□□□ 0.19
GTF3A-209ENST00000640289 ARAP2Q8WZ64 1704 aa16.22■□□□□ 0.19
GTF3A-209ENST00000640289 SCN9AQ15858 1988 aa16.22■□□□□ 0.19
GTF3A-209ENST00000640289 GMPSP49915 693 aaPredicted RBP16.22■□□□□ 0.19
GTF3A-209ENST00000640289 STRIP1Q5VSL9 837 aa16.22■□□□□ 0.19
GTF3A-209ENST00000640289 ZNF784Q8NCA9 323 aaPredicted RBP16.22■□□□□ 0.19
GTF3A-209ENST00000640289 NMRK2Q9NPI5 230 aa16.22■□□□□ 0.19
GTF3A-209ENST00000640289 COL1A1P02452 1464 aaPredicted RBP16.22■□□□□ 0.19
GTF3A-209ENST00000640289 KDM2BQ8NHM5 1336 aa16.21■□□□□ 0.19
GTF3A-209ENST00000640289 SHTN1A0MZ66 631 aa16.21■□□□□ 0.19
GTF3A-209ENST00000640289 POTECB2RU33 542 aa16.21■□□□□ 0.19
GTF3A-209ENST00000640289 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.19
GTF3A-209ENST00000640289 SCNN1DP51172 638 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms