RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 TAF1LQ8IZX4 1826 aa14.64□□□□□ -0.07
PAX6-261ENST00000639943 KRT32Q14532 448 aa14.64□□□□□ -0.07
PAX6-261ENST00000639943 SEPT12Q8IYM1 358 aa14.64□□□□□ -0.07
PAX6-261ENST00000639943 LPIN2Q92539 896 aa14.64□□□□□ -0.07
PAX6-261ENST00000639943 NARFQ9UHQ1 456 aa14.64□□□□□ -0.07
PAX6-261ENST00000639943 MYH7P12883 1935 aa14.64□□□□□ -0.07
PAX6-261ENST00000639943 AKAP11Q9UKA4 1901 aa14.64□□□□□ -0.07
PAX6-261ENST00000639943 IGHMBP2P38935 993 aaKnown RBP14.64□□□□□ -0.07
PAX6-261ENST00000639943 CCDC129Q6ZRS4 1044 aa14.64□□□□□ -0.07
PAX6-261ENST00000639943 ARAP2Q8WZ64 1704 aa14.64□□□□□ -0.07
PAX6-261ENST00000639943 CHGBP05060 677 aa14.63□□□□□ -0.07
PAX6-261ENST00000639943 FGFR2P21802 821 aa14.63□□□□□ -0.07
PAX6-261ENST00000639943 ZSCAN31Q96LW9 406 aaPredicted RBP14.63□□□□□ -0.07
PAX6-261ENST00000639943 DSCC1Q9BVC3 393 aa14.63□□□□□ -0.07
PAX6-261ENST00000639943 SEC31BQ9NQW1 1179 aa14.63□□□□□ -0.07
PAX6-261ENST00000639943 GNPATO15228 680 aa14.63□□□□□ -0.07
PAX6-261ENST00000639943 UQCRFS1P1P0C7P4 283 aa14.63□□□□□ -0.07
PAX6-261ENST00000639943 SLC5A1P13866 664 aa14.63□□□□□ -0.07
PAX6-261ENST00000639943 ZAP70P43403 619 aa14.63□□□□□ -0.07
PAX6-261ENST00000639943 RTCBQ9Y3I0 505 aaKnown RBP14.63□□□□□ -0.07
PAX6-261ENST00000639943 GOLGA6L22H0YM25 854 aa14.62□□□□□ -0.07
PAX6-261ENST00000639943 ZPR1O75312 459 aa14.62□□□□□ -0.07
PAX6-261ENST00000639943 CPA1P15085 419 aa14.62□□□□□ -0.07
PAX6-261ENST00000639943 SCARF1Q14162 830 aa14.62□□□□□ -0.07
PAX6-261ENST00000639943 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
PAX6-261ENST00000639943 CDC5LQ99459 802 aaKnown RBP14.62□□□□□ -0.07
PAX6-261ENST00000639943 SH2B1Q9NRF2 756 aaPredicted RBP14.62□□□□□ -0.07
PAX6-261ENST00000639943 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
PAX6-261ENST00000639943 ECM2O94769 699 aaPredicted RBP14.62□□□□□ -0.07
PAX6-261ENST00000639943 TTF1Q15361 905 aaPredicted RBP14.62□□□□□ -0.07
PAX6-261ENST00000639943 NYXQ9GZU5 481 aa14.62□□□□□ -0.07
PAX6-261ENST00000639943 ALDH8A1Q9H2A2 487 aaPredicted RBP14.62□□□□□ -0.07
PAX6-261ENST00000639943 QTRT2Q9H974 415 aaKnown RBP14.62□□□□□ -0.07
PAX6-261ENST00000639943 BCL2L12Q9HB09 334 aa14.62□□□□□ -0.07
PAX6-261ENST00000639943 TRAK2O60296 914 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 MCAMP43121 646 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 ANKRD1Q15327 319 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 ERFEQ4G0M1 354 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 BCL11BQ9C0K0 894 aaPredicted RBP14.61□□□□□ -0.07
PAX6-261ENST00000639943 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.61□□□□□ -0.07
PAX6-261ENST00000639943 MAST3O60307 1309 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 BAG4O95429 457 aaKnown RBP14.61□□□□□ -0.07
PAX6-261ENST00000639943 RPS6KB1P23443 525 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 ARID4AP29374 1257 aaPredicted RBP14.61□□□□□ -0.07
PAX6-261ENST00000639943 SF3B3Q15393 1217 aaKnown RBP14.61□□□□□ -0.07
PAX6-261ENST00000639943 SLC10A5Q5PT55 438 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 TBC1D9BQ66K14 1250 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 CCDC102BQ68D86 513 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 ZSCAN25Q6NSZ9 544 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 HELBQ8NG08 1087 aaPredicted RBP14.61□□□□□ -0.07
PAX6-261ENST00000639943 SETDB2Q96T68 719 aa14.61□□□□□ -0.07
PAX6-261ENST00000639943 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.61□□□□□ -0.07
PAX6-261ENST00000639943 PKP1Q13835 747 aa14.6□□□□□ -0.07
PAX6-261ENST00000639943 GTF2E1P29083 439 aaPredicted RBP14.6□□□□□ -0.07
PAX6-261ENST00000639943 SLFNL1Q499Z3 407 aa14.6□□□□□ -0.07
PAX6-261ENST00000639943 BICDL1Q6ZP65 573 aa14.6□□□□□ -0.07
PAX6-261ENST00000639943 CASZ1Q86V15 1759 aa14.59□□□□□ -0.07
PAX6-261ENST00000639943 PHKA1P46020 1223 aa14.59□□□□□ -0.07
PAX6-261ENST00000639943 SKOR2Q2VWA4 1001 aaPredicted RBP14.59□□□□□ -0.07
PAX6-261ENST00000639943 APPBP2Q92624 585 aa14.59□□□□□ -0.07
PAX6-261ENST00000639943 OSBP2Q969R2 916 aa14.59□□□□□ -0.07
PAX6-261ENST00000639943 SRP68Q9UHB9 627 aaKnown RBP14.59□□□□□ -0.07
PAX6-261ENST00000639943 ZDHHC9Q9Y397 364 aa14.59□□□□□ -0.07
PAX6-261ENST00000639943 C4BP0C0L5 1744 aa14.59□□□□□ -0.07
PAX6-261ENST00000639943 COL24A1Q17RW2 1714 aa14.59□□□□□ -0.07
PAX6-261ENST00000639943 HSPD1P10809 573 aaKnown RBP14.59□□□□□ -0.07
PAX6-261ENST00000639943 WASHC4Q2M389 1173 aa14.59□□□□□ -0.07
PAX6-261ENST00000639943 NEK1Q96PY6 1258 aa14.59□□□□□ -0.07
PAX6-261ENST00000639943 M0R2C6 588 aa14.58□□□□□ -0.08
PAX6-261ENST00000639943 BRD1O95696 1058 aa14.58□□□□□ -0.08
PAX6-261ENST00000639943 CYP21A2P08686 494 aa14.58□□□□□ -0.08
PAX6-261ENST00000639943 PI16Q6UXB8 463 aa14.58□□□□□ -0.08
PAX6-261ENST00000639943 ANKRD18AQ8IVF6 992 aa14.58□□□□□ -0.08
PAX6-261ENST00000639943 ARHGEF1Q92888 912 aaKnown RBP14.58□□□□□ -0.08
PAX6-261ENST00000639943 TAF6LQ9Y6J9 622 aa14.58□□□□□ -0.08
PAX6-261ENST00000639943 SMIM5Q71RC9 77 aa14.58□□□□□ -0.08
PAX6-261ENST00000639943 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.08
PAX6-261ENST00000639943 HMGB1P09429 215 aaKnown RBP14.57□□□□□ -0.08
PAX6-261ENST00000639943 CHRNDQ07001 517 aa14.57□□□□□ -0.08
PAX6-261ENST00000639943 NBPF5PQ86XG9 351 aaPredicted RBP14.57□□□□□ -0.08
PAX6-261ENST00000639943 SMC3Q9UQE7 1217 aa14.57□□□□□ -0.08
PAX6-261ENST00000639943 RFC4P35249 363 aa14.57□□□□□ -0.08
PAX6-261ENST00000639943 TRAPPC3LQ5T215 181 aa14.57□□□□□ -0.08
PAX6-261ENST00000639943 TPTE2Q6XPS3 522 aa14.57□□□□□ -0.08
PAX6-261ENST00000639943 CTNNA3Q9UI47 895 aa14.57□□□□□ -0.08
PAX6-261ENST00000639943 LARGE1O95461 756 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 C4AP0C0L4 1744 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 ADD2P35612 726 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 FAM196AQ6ZSG2 479 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 BSDC1Q9NW68 430 aaPredicted RBP14.56□□□□□ -0.08
PAX6-261ENST00000639943 MYO5AQ9Y4I1 1855 aaKnown RBP14.56□□□□□ -0.08
PAX6-261ENST00000639943 LAMA4Q16363 1823 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 UBE3CQ15386 1083 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 ME3Q16798 604 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 CCDC83Q8IWF9 413 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 SPATA5Q8NB90 893 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 NLRP3Q96P20 1036 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 TPCN1Q9ULQ1 816 aa14.56□□□□□ -0.08
PAX6-261ENST00000639943 WDR33Q9C0J8 1336 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms