RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 A0A1B0GVL5 298 aa23.9■■□□□ 1.42
PMS1-222ENST00000639501 CCT2P78371 535 aaKnown RBP23.9■■□□□ 1.42
PMS1-222ENST00000639501 CALCOCO1Q9P1Z2 691 aa23.9■■□□□ 1.42
PMS1-222ENST00000639501 PFKFB2O60825 505 aa23.89■■□□□ 1.42
PMS1-222ENST00000639501 APOBRQ0VD83 1088 aa23.89■■□□□ 1.42
PMS1-222ENST00000639501 IMPACTQ9P2X3 320 aa23.89■■□□□ 1.42
PMS1-222ENST00000639501 PCDHA7Q9UN72 937 aa23.89■■□□□ 1.41
PMS1-222ENST00000639501 TULP2O00295 520 aa23.88■■□□□ 1.41
PMS1-222ENST00000639501 HNRNPH2P55795 449 aaKnown RBP23.88■■□□□ 1.41
PMS1-222ENST00000639501 MPRIPQ6WCQ1 1025 aa23.88■■□□□ 1.41
PMS1-222ENST00000639501 PSDA5PKW4 1024 aaPredicted RBP23.88■■□□□ 1.41
PMS1-222ENST00000639501 ZRANB2O95218 330 aaKnown RBP eCLIP23.88■■□□□ 1.415e-9■□□□□ 10.7
PMS1-222ENST00000639501 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.88■■□□□ 1.41
PMS1-222ENST00000639501 TMEM94Q12767 1356 aa23.87■■□□□ 1.41
PMS1-222ENST00000639501 SFPQP23246 707 aaKnown RBP eCLIP23.87■■□□□ 1.41
PMS1-222ENST00000639501 NDUFA8P51970 172 aa23.87■■□□□ 1.41
PMS1-222ENST00000639501 MAPK8IP2Q13387 824 aaPredicted RBP23.87■■□□□ 1.41
PMS1-222ENST00000639501 CCDC150Q8NCX0 1101 aa23.87■■□□□ 1.41
PMS1-222ENST00000639501 CDK11BP21127 795 aaKnown RBP23.87■■□□□ 1.41
PMS1-222ENST00000639501 NBPF6Q5VWK0 638 aa23.87■■□□□ 1.41
PMS1-222ENST00000639501 NBPF4Q96M43 638 aa23.87■■□□□ 1.41
PMS1-222ENST00000639501 FMNL2Q96PY5 1086 aa23.87■■□□□ 1.41
PMS1-222ENST00000639501 NAT10Q9H0A0 1025 aaKnown RBP23.87■■□□□ 1.41
PMS1-222ENST00000639501 DBNLQ9UJU6 430 aaKnown RBP23.87■■□□□ 1.41
PMS1-222ENST00000639501 A0A0G2JLW4 131 aa23.86■■□□□ 1.41
PMS1-222ENST00000639501 BIN1O00499 593 aa23.86■■□□□ 1.41
PMS1-222ENST00000639501 SEC31AO94979 1220 aaKnown RBP23.86■■□□□ 1.41
PMS1-222ENST00000639501 TEFQ10587 303 aa23.86■■□□□ 1.41
PMS1-222ENST00000639501 NCAPD2Q15021 1401 aa23.86■■□□□ 1.41
PMS1-222ENST00000639501 MRPS27Q92552 414 aaKnown RBP23.86■■□□□ 1.41
PMS1-222ENST00000639501 SDF4Q9BRK5 362 aa23.86■■□□□ 1.41
PMS1-222ENST00000639501 LLPHQ9BRT6 129 aaKnown RBP23.86■■□□□ 1.41
PMS1-222ENST00000639501 MRC1P22897 1456 aa23.86■■□□□ 1.41
PMS1-222ENST00000639501 ORC3Q9UBD5 711 aaPredicted RBP23.86■■□□□ 1.41
PMS1-222ENST00000639501 DNAI1Q9UI46 699 aa23.86■■□□□ 1.41
PMS1-222ENST00000639501 AIMP1Q12904 312 aaKnown RBP23.85■■□□□ 1.41
PMS1-222ENST00000639501 EPHA10Q5JZY3 1008 aa23.85■■□□□ 1.41
PMS1-222ENST00000639501 LINS1Q8NG48 757 aa23.85■■□□□ 1.41
PMS1-222ENST00000639501 UTYO14607 1347 aa23.85■■□□□ 1.41
PMS1-222ENST00000639501 SALL1Q9NSC2 1324 aa23.85■■□□□ 1.41
PMS1-222ENST00000639501 ZNF396Q96N95 335 aaPredicted RBP23.85■■□□□ 1.41
PMS1-222ENST00000639501 U3KPZ7 1027 aaPredicted RBP23.85■■□□□ 1.41
PMS1-222ENST00000639501 POLR3GO15318 223 aaPredicted RBP23.84■■□□□ 1.41
PMS1-222ENST00000639501 FAM193AP78312 1265 aa23.84■■□□□ 1.41
PMS1-222ENST00000639501 NCAPHQ15003 741 aa23.84■■□□□ 1.41
PMS1-222ENST00000639501 CREBRFQ8IUR6 639 aa23.84■■□□□ 1.41
PMS1-222ENST00000639501 NEK11Q8NG66 645 aa23.84■■□□□ 1.41
PMS1-222ENST00000639501 DNAJC2Q99543 621 aaKnown RBP23.84■■□□□ 1.41
PMS1-222ENST00000639501 KIAA1468Q9P260 1216 aa23.84■■□□□ 1.41
PMS1-222ENST00000639501 HOMER1Q86YM7 354 aa23.84■■□□□ 1.41
PMS1-222ENST00000639501 EPC1Q9H2F5 836 aa23.84■■□□□ 1.41
PMS1-222ENST00000639501 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
PMS1-222ENST00000639501 IGKV5-2P06315 115 aa23.83■■□□□ 1.41
PMS1-222ENST00000639501 C19orf44Q9H6X5 657 aa23.83■■□□□ 1.41
PMS1-222ENST00000639501 ETF1P62495 437 aaKnown RBP23.83■■□□□ 1.41
PMS1-222ENST00000639501 TRIM65Q6PJ69 517 aa23.83■■□□□ 1.41
PMS1-222ENST00000639501 NAP1L2Q9ULW6 460 aaPredicted RBP23.83■■□□□ 1.41
PMS1-222ENST00000639501 OTUD7BQ6GQQ9 843 aa23.82■■□□□ 1.4
PMS1-222ENST00000639501 ABTB2Q8N961 1025 aa23.82■■□□□ 1.4
PMS1-222ENST00000639501 LTN1O94822 1766 aa23.82■■□□□ 1.4
PMS1-222ENST00000639501 RGPD2P0DJD1 1756 aa23.82■■□□□ 1.4
PMS1-222ENST00000639501 ATP1A3P13637 1013 aa23.82■■□□□ 1.4
PMS1-222ENST00000639501 KCNJ6P48051 423 aa23.82■■□□□ 1.4
PMS1-222ENST00000639501 ESCO1Q5FWF5 840 aa23.82■■□□□ 1.4
PMS1-222ENST00000639501 ZNF530Q6P9A1 599 aaPredicted RBP23.82■■□□□ 1.4
PMS1-222ENST00000639501 DDX46Q7L014 1031 aaKnown RBP23.82■■□□□ 1.4
PMS1-222ENST00000639501 PXDNQ92626 1479 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 LMOD1P29536 600 aaPredicted RBP23.81■■□□□ 1.4
PMS1-222ENST00000639501 GOLGA8FQ08AF8 430 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 GOLGA8DPQ0D2H9 430 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 PTPN21Q16825 1174 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 CHST3Q7LGC8 479 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 CLIC4Q9Y696 253 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 TADA3O75528 432 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 ATP5JP18859 108 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 TMCO3Q6UWJ1 677 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 DHX32Q7L7V1 743 aaKnown RBP23.81■■□□□ 1.4
PMS1-222ENST00000639501 UBXN4Q92575 508 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 BPIFA3Q9BQP9 254 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 PHF8Q9UPP1 1060 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 LMO7Q8WWI1 1683 aa23.81■■□□□ 1.4
PMS1-222ENST00000639501 CARMIL3Q8ND23 1372 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 SASH3O75995 380 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 ST5P78524 1137 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 ADALQ6DHV7 355 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 ISM2Q6H9L7 571 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 HSD3B7Q9H2F3 369 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 PHLPP2Q6ZVD8 1323 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 FDPSP14324 419 aaKnown RBP23.8■■□□□ 1.4
PMS1-222ENST00000639501 MCMDC2Q4G0Z9 681 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 CARD6Q9BX69 1037 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 HDAC5Q9UQL6 1122 aa23.8■■□□□ 1.4
PMS1-222ENST00000639501 TFCP2Q12800 502 aa23.79■■□□□ 1.4
PMS1-222ENST00000639501 ATL3Q6DD88 541 aa23.79■■□□□ 1.4
PMS1-222ENST00000639501 DPF2Q92785 391 aa23.79■■□□□ 1.4
PMS1-222ENST00000639501 TNNI3KQ59H18 835 aa23.79■■□□□ 1.4
PMS1-222ENST00000639501 LINC00301Q8NCQ3 95 aa23.79■■□□□ 1.4
PMS1-222ENST00000639501 LRRC59Q96AG4 307 aaKnown RBP23.79■■□□□ 1.4
PMS1-222ENST00000639501 CHMP4AQ9BY43 222 aa23.79■■□□□ 1.4
PMS1-222ENST00000639501 ZCCHC17Q9NP64 241 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms