RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 FAM161AQ3B820 660 aa21.54■■□□□ 1.04
SMN2-216ENST00000638794 SULF1Q8IWU6 871 aa21.54■■□□□ 1.04
SMN2-216ENST00000638794 MYH16Q9H6N6 1097 aa21.54■■□□□ 1.04
SMN2-216ENST00000638794 USP17L8P0C7I0 530 aa21.53■■□□□ 1.04
SMN2-216ENST00000638794 ITGA6P23229 1130 aa21.53■■□□□ 1.04
SMN2-216ENST00000638794 IGHMBP2P38935 993 aaKnown RBP21.53■■□□□ 1.04
SMN2-216ENST00000638794 NOGQ13253 232 aa21.53■■□□□ 1.04
SMN2-216ENST00000638794 SCARF1Q14162 830 aa21.53■■□□□ 1.04
SMN2-216ENST00000638794 C2orf69Q8N8R5 385 aa21.53■■□□□ 1.04
SMN2-216ENST00000638794 LINS1Q8NG48 757 aa21.53■■□□□ 1.04
SMN2-216ENST00000638794 ZIC5Q96T25 663 aa21.53■■□□□ 1.04
SMN2-216ENST00000638794 CA12O43570 354 aa21.52■■□□□ 1.04
SMN2-216ENST00000638794 ANGEL2Q5VTE6 544 aaKnown RBP21.52■■□□□ 1.04
SMN2-216ENST00000638794 RGMBQ6NW40 437 aa21.52■■□□□ 1.04
SMN2-216ENST00000638794 MYOZ2Q9NPC6 264 aa21.52■■□□□ 1.04
SMN2-216ENST00000638794 SPINK5Q9NQ38 1064 aaPredicted RBP21.52■■□□□ 1.04
SMN2-216ENST00000638794 CASP8AP2Q9UKL3 1982 aa21.51■■□□□ 1.03
SMN2-216ENST00000638794 CSF1RP07333 972 aa21.51■■□□□ 1.03
SMN2-216ENST00000638794 TXNRD3Q86VQ6 643 aa21.51■■□□□ 1.03
SMN2-216ENST00000638794 CDCA5Q96FF9 252 aa21.51■■□□□ 1.03
SMN2-216ENST00000638794 FAM155AB1AL88 458 aaPredicted RBP21.5■■□□□ 1.03
SMN2-216ENST00000638794 DACT2Q5SW24 774 aa21.5■■□□□ 1.03
SMN2-216ENST00000638794 ABHD8Q96I13 439 aa21.5■■□□□ 1.03
SMN2-216ENST00000638794 MPHOSPH8Q99549 860 aa21.5■■□□□ 1.03
SMN2-216ENST00000638794 MXD3Q9BW11 206 aa21.5■■□□□ 1.03
SMN2-216ENST00000638794 LEMD3Q9Y2U8 911 aa21.5■■□□□ 1.03
SMN2-216ENST00000638794 A0A1B0GUL6 1792 aa21.49■■□□□ 1.03
SMN2-216ENST00000638794 F6X3S4 739 aa21.49■■□□□ 1.03
SMN2-216ENST00000638794 KLRK1P26718 216 aa21.49■■□□□ 1.03
SMN2-216ENST00000638794 FBXW7Q969H0 707 aa21.49■■□□□ 1.03
SMN2-216ENST00000638794 COA1Q9GZY4 146 aa21.49■■□□□ 1.03
SMN2-216ENST00000638794 ZNF804BA4D1E1 1349 aa21.49■■□□□ 1.03
SMN2-216ENST00000638794 ANKRD2Q9GZV1 360 aa21.48■■□□□ 1.03
SMN2-216ENST00000638794 PITPNM2Q9BZ72 1349 aa21.48■■□□□ 1.03
SMN2-216ENST00000638794 ZNF157P51786 506 aaPredicted RBP21.47■■□□□ 1.03
SMN2-216ENST00000638794 STRIP1Q5VSL9 837 aa21.47■■□□□ 1.03
SMN2-216ENST00000638794 CCDC102AQ96A19 550 aa21.47■■□□□ 1.03
SMN2-216ENST00000638794 PAPPA2Q9BXP8 1791 aa21.46■■□□□ 1.03
SMN2-216ENST00000638794 CHRNDQ07001 517 aa21.46■■□□□ 1.03
SMN2-216ENST00000638794 NBPF9Q3BBW0 867 aa21.46■■□□□ 1.03
SMN2-216ENST00000638794 BEND3Q5T5X7 828 aa21.46■■□□□ 1.03
SMN2-216ENST00000638794 FAM9BQ8IZU0 186 aa21.46■■□□□ 1.03
SMN2-216ENST00000638794 SCAF8Q9UPN6 1271 aaKnown RBP21.46■■□□□ 1.03
SMN2-216ENST00000638794 MYO3BQ8WXR4 1341 aa21.46■■□□□ 1.03
SMN2-216ENST00000638794 ANKRD18BA2A2Z9 1011 aa21.45■■□□□ 1.02
SMN2-216ENST00000638794 FOXO4P98177 505 aa21.45■■□□□ 1.02
SMN2-216ENST00000638794 OGFOD1Q8N543 542 aa21.45■■□□□ 1.02
SMN2-216ENST00000638794 AKAP11Q9UKA4 1901 aa21.45■■□□□ 1.02
SMN2-216ENST00000638794 SLC10A3P09131 477 aa21.44■■□□□ 1.02
SMN2-216ENST00000638794 KCNJ4P48050 445 aa21.44■■□□□ 1.02
SMN2-216ENST00000638794 KIF23Q02241 960 aaPredicted RBP21.44■■□□□ 1.02
SMN2-216ENST00000638794 WNT10BO00744 389 aa21.43■■□□□ 1.02
SMN2-216ENST00000638794 IFIT5Q13325 482 aaKnown RBP21.43■■□□□ 1.02
SMN2-216ENST00000638794 TTLL5Q6EMB2 1281 aa21.43■■□□□ 1.02
SMN2-216ENST00000638794 CHMP3Q9Y3E7 222 aa21.43■■□□□ 1.02
SMN2-216ENST00000638794 SNAP23O00161 211 aa21.42■■□□□ 1.02
SMN2-216ENST00000638794 TAF5LO75529 589 aa21.42■■□□□ 1.02
SMN2-216ENST00000638794 IRS2Q9Y4H2 1338 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 GRM8O00222 908 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 SASH1O94885 1247 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 FKBP1BP68106 108 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 GTF2IP78347 998 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 EPHA10Q5JZY3 1008 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 PRAMEF18Q5VWM3 479 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 LMBR1LQ6UX01 489 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 KIAA0825Q8IV33 1275 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 HELBQ8NG08 1087 aaPredicted RBP21.41■■□□□ 1.02
SMN2-216ENST00000638794 CD209Q9NNX6 404 aa21.41■■□□□ 1.02
SMN2-216ENST00000638794 MOB2Q70IA6 237 aa21.4■■□□□ 1.02
SMN2-216ENST00000638794 RASAL3Q86YV0 1011 aa21.4■■□□□ 1.02
SMN2-216ENST00000638794 SAGE1Q9NXZ1 904 aa21.4■■□□□ 1.02
SMN2-216ENST00000638794 MMP14P50281 582 aa21.39■■□□□ 1.01
SMN2-216ENST00000638794 CSRNP1Q96S65 589 aa21.39■■□□□ 1.01
SMN2-216ENST00000638794 MCOLN1Q9GZU1 580 aa21.39■■□□□ 1.01
SMN2-216ENST00000638794 CCDC85CA6NKD9 419 aa21.38■■□□□ 1.01
SMN2-216ENST00000638794 SLC4A10Q6U841 1118 aa21.38■■□□□ 1.01
SMN2-216ENST00000638794 C15orf52Q6ZUT6 534 aaKnown RBP21.38■■□□□ 1.01
SMN2-216ENST00000638794 ZNF594Q96JF6 807 aaPredicted RBP21.38■■□□□ 1.01
SMN2-216ENST00000638794 RNF186Q9NXI6 227 aa21.38■■□□□ 1.01
SMN2-216ENST00000638794 C9orf78Q9NZ63 289 aaPredicted RBP21.38■■□□□ 1.01
SMN2-216ENST00000638794 HDAC9Q9UKV0 1011 aa21.38■■□□□ 1.01
SMN2-216ENST00000638794 ZNF521Q96K83 1311 aa21.37■■□□□ 1.01
SMN2-216ENST00000638794 TRPA1O75762 1119 aa21.37■■□□□ 1.01
SMN2-216ENST00000638794 ALDH1L1O75891 902 aa21.37■■□□□ 1.01
SMN2-216ENST00000638794 CCDC57Q2TAC2 916 aa21.37■■□□□ 1.01
SMN2-216ENST00000638794 ZBED3Q96IU2 234 aaPredicted RBP21.37■■□□□ 1.01
SMN2-216ENST00000638794 ECM29Q5VYK3 1845 aa21.36■■□□□ 1.01
SMN2-216ENST00000638794 UBE2Q2LH0YL09 131 aa21.36■■□□□ 1.01
SMN2-216ENST00000638794 DGKZQ13574 1117 aa21.36■■□□□ 1.01
SMN2-216ENST00000638794 TAF7LQ5H9L4 462 aa21.36■■□□□ 1.01
SMN2-216ENST00000638794 CERS5Q8N5B7 392 aa21.36■■□□□ 1.01
SMN2-216ENST00000638794 SRCIN1Q9C0H9 1055 aa21.36■■□□□ 1.01
SMN2-216ENST00000638794 TTLL12Q14166 644 aaPredicted RBP21.35■■□□□ 1.01
SMN2-216ENST00000638794 LDHAL6AQ6ZMR3 332 aa21.35■■□□□ 1.01
SMN2-216ENST00000638794 ZNF804AQ7Z570 1209 aa21.35■■□□□ 1.01
SMN2-216ENST00000638794 APOBEC3FQ8IUX4 373 aaKnown RBP21.35■■□□□ 1.01
SMN2-216ENST00000638794 PLIN1O60240 522 aa21.34■■□□□ 1.01
SMN2-216ENST00000638794 IL1R1P14778 569 aa21.34■■□□□ 1.01
SMN2-216ENST00000638794 NF2P35240 595 aa21.34■■□□□ 1.01
SMN2-216ENST00000638794 CNNM1Q9NRU3 951 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms