RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 LMOD2Q6P5Q4 547 aa17.09■□□□□ 0.33
CLN6-215ENST00000636674 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
CLN6-215ENST00000636674 CTDNEP1O95476 244 aa17.08■□□□□ 0.33
CLN6-215ENST00000636674 STX1AQ16623 288 aa17.08■□□□□ 0.33
CLN6-215ENST00000636674 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.33
CLN6-215ENST00000636674 FBXL16Q8N461 479 aa17.08■□□□□ 0.33
CLN6-215ENST00000636674 MRFAP1L1Q96HT8 127 aa17.08■□□□□ 0.33
CLN6-215ENST00000636674 PTPDC1A2A3K4 754 aa17.08■□□□□ 0.32
CLN6-215ENST00000636674 ZMYM1Q5SVZ6 1142 aa17.08■□□□□ 0.32
CLN6-215ENST00000636674 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.32
CLN6-215ENST00000636674 H7C1W4 665 aa17.07■□□□□ 0.32
CLN6-215ENST00000636674 CHGBP05060 677 aa17.07■□□□□ 0.32
CLN6-215ENST00000636674 ADRA2BP18089 450 aa17.07■□□□□ 0.32
CLN6-215ENST00000636674 FOXO4P98177 505 aa17.07■□□□□ 0.32
CLN6-215ENST00000636674 DDX11Q96FC9 970 aa17.07■□□□□ 0.32
CLN6-215ENST00000636674 PAG1Q9NWQ8 432 aa17.07■□□□□ 0.32
CLN6-215ENST00000636674 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
CLN6-215ENST00000636674 CLIP2Q9UDT6 1046 aa17.07■□□□□ 0.32
CLN6-215ENST00000636674 SMTNL1A8MU46 457 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 NEMFO60524 1076 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 LRMPQ12912 555 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 DRC7Q8IY82 874 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 ZNF274Q96GC6 653 aaPredicted RBP17.06■□□□□ 0.32
CLN6-215ENST00000636674 ZNF396Q96N95 335 aaPredicted RBP17.06■□□□□ 0.32
CLN6-215ENST00000636674 NRBP1Q9UHY1 535 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 PAPPAQ13219 1627 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 FGD1P98174 961 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 SNW1Q13573 536 aaKnown RBP17.06■□□□□ 0.32
CLN6-215ENST00000636674 LMBR1LQ6UX01 489 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 ENGASEQ8NFI3 743 aa17.06■□□□□ 0.32
CLN6-215ENST00000636674 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLN6-215ENST00000636674 CYP27B1O15528 508 aa17.05■□□□□ 0.32
CLN6-215ENST00000636674 EVCP57679 992 aa17.05■□□□□ 0.32
CLN6-215ENST00000636674 ZC3H6P61129 1189 aaKnown RBP17.05■□□□□ 0.32
CLN6-215ENST00000636674 CCDC73Q6ZRK6 1079 aa17.05■□□□□ 0.32
CLN6-215ENST00000636674 CCAR1Q8IX12 1150 aaKnown RBP17.05■□□□□ 0.32
CLN6-215ENST00000636674 ATP5J2-PTCD1G3V325 749 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 GOLGA6L19H0YKK7 550 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
CLN6-215ENST00000636674 IL15P40933 162 aaPredicted RBP17.04■□□□□ 0.32
CLN6-215ENST00000636674 FAM160A1Q05DH4 1040 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
CLN6-215ENST00000636674 CACTINQ8WUQ7 758 aaKnown RBP17.04■□□□□ 0.32
CLN6-215ENST00000636674 USP28Q96RU2 1077 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 LRRC2Q9BYS8 371 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 GOLPH3LQ9H4A5 285 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 NWD2Q9ULI1 1742 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 TNS3Q68CZ2 1445 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 E7EWF7 191 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 RBM6P78332 1123 aaKnown RBP17.04■□□□□ 0.32
CLN6-215ENST00000636674 APOBRQ0VD83 1088 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 PDCL2Q8N4E4 241 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 PAXBP1Q9Y5B6 917 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 SPATA31A3Q5VYP0 1347 aa17.04■□□□□ 0.32
CLN6-215ENST00000636674 GOLIM4O00461 696 aa17.03■□□□□ 0.32
CLN6-215ENST00000636674 HSPD1P10809 573 aaKnown RBP17.03■□□□□ 0.32
CLN6-215ENST00000636674 CCDC144BQ3MJ40 725 aa17.03■□□□□ 0.32
CLN6-215ENST00000636674 CCDC144CPQ8IYA2 1237 aa17.03■□□□□ 0.32
CLN6-215ENST00000636674 ATG3Q9NT62 314 aa17.03■□□□□ 0.32
CLN6-215ENST00000636674 ANO10Q9NW15 660 aa17.03■□□□□ 0.32
CLN6-215ENST00000636674 PRDM4Q9UKN5 801 aa17.03■□□□□ 0.32
CLN6-215ENST00000636674 MAST3O60307 1309 aa17.03■□□□□ 0.32
CLN6-215ENST00000636674 CARMIL3Q8ND23 1372 aa17.03■□□□□ 0.32
CLN6-215ENST00000636674 KINO60870 393 aaKnown RBP17.03■□□□□ 0.32
CLN6-215ENST00000636674 CIAO1O76071 339 aa17.03■□□□□ 0.32
CLN6-215ENST00000636674 PDIA3P30101 505 aaKnown RBP17.03■□□□□ 0.32
CLN6-215ENST00000636674 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
CLN6-215ENST00000636674 PPP4R3BQ5MIZ7 849 aa17.02■□□□□ 0.32
CLN6-215ENST00000636674 LRRC8AQ8IWT6 810 aa17.02■□□□□ 0.32
CLN6-215ENST00000636674 KCND1Q9NSA2 647 aa17.02■□□□□ 0.32
CLN6-215ENST00000636674 A0A1W2PQ27 194 aa17.01■□□□□ 0.31
CLN6-215ENST00000636674 A0A1W2PQ64 194 aa17.01■□□□□ 0.31
CLN6-215ENST00000636674 A0A1W2PQD8 194 aa17.01■□□□□ 0.31
CLN6-215ENST00000636674 FAM177BA6PVY3 158 aa17.01■□□□□ 0.31
CLN6-215ENST00000636674 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
CLN6-215ENST00000636674 TNNT1P13805 278 aa17.01■□□□□ 0.31
CLN6-215ENST00000636674 UTP14CQ5TAP6 766 aaKnown RBP17.01■□□□□ 0.31
CLN6-215ENST00000636674 DHX40Q8IX18 779 aaKnown RBP17.01■□□□□ 0.31
CLN6-215ENST00000636674 C16orf45Q96MC5 204 aaPredicted RBP17.01■□□□□ 0.31
CLN6-215ENST00000636674 CWC25Q9NXE8 425 aaPredicted RBP17.01■□□□□ 0.31
CLN6-215ENST00000636674 NUTM2BA6NNL0 878 aaPredicted RBP17.01■□□□□ 0.31
CLN6-215ENST00000636674 NUTM2EB1AL46 878 aaPredicted RBP17.01■□□□□ 0.31
CLN6-215ENST00000636674 EYA2O00167 538 aa17.01■□□□□ 0.31
CLN6-215ENST00000636674 NUTM2AQ8IVF1 878 aaPredicted RBP17.01■□□□□ 0.31
CLN6-215ENST00000636674 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
CLN6-215ENST00000636674 FTOQ9C0B1 505 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLN6-215ENST00000636674 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
CLN6-215ENST00000636674 ABCA3Q99758 1704 aa17■□□□□ 0.31
CLN6-215ENST00000636674 KCPQ6ZWJ8 1503 aa17■□□□□ 0.31
CLN6-215ENST00000636674 MYH7P12883 1935 aa17■□□□□ 0.31
CLN6-215ENST00000636674 CABP4P57796 275 aa17■□□□□ 0.31
CLN6-215ENST00000636674 CEBPZQ03701 1054 aaKnown RBP17■□□□□ 0.31
CLN6-215ENST00000636674 NCBP1Q09161 790 aaKnown RBP17■□□□□ 0.31
CLN6-215ENST00000636674 MEX3CQ5U5Q3 659 aaKnown RBP17■□□□□ 0.31
CLN6-215ENST00000636674 CEP57L1Q8IYX8 460 aa17■□□□□ 0.31
CLN6-215ENST00000636674 ARID3AQ99856 593 aa17■□□□□ 0.31
CLN6-215ENST00000636674 RGS17Q9UGC6 210 aaPredicted RBP17■□□□□ 0.31
CLN6-215ENST00000636674 NBPF26B4DH59 902 aa16.99■□□□□ 0.31
CLN6-215ENST00000636674 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms