RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 MYO3BQ8WXR4 1341 aa23■■□□□ 1.27
CLN6-210ENST00000635747 USP17L8P0C7I0 530 aa22.99■■□□□ 1.27
CLN6-210ENST00000635747 KIF4BQ2VIQ3 1234 aa22.99■■□□□ 1.27
CLN6-210ENST00000635747 RBM26Q5T8P6 1007 aaKnown RBP22.99■■□□□ 1.27
CLN6-210ENST00000635747 DCPSQ96C86 337 aaKnown RBP22.99■■□□□ 1.27
CLN6-210ENST00000635747 GLIS2Q9BZE0 524 aaPredicted RBP22.99■■□□□ 1.27
CLN6-210ENST00000635747 SPEF2Q9C093 1822 aa22.98■■□□□ 1.27
CLN6-210ENST00000635747 RABL6Q3YEC7 729 aaPredicted RBP22.98■■□□□ 1.27
CLN6-210ENST00000635747 CST9Q5W186 159 aa22.98■■□□□ 1.27
CLN6-210ENST00000635747 TXNRD3Q86VQ6 643 aa22.98■■□□□ 1.27
CLN6-210ENST00000635747 KAZALD1Q96I82 304 aa22.98■■□□□ 1.27
CLN6-210ENST00000635747 API5Q9BZZ5 524 aaKnown RBP22.98■■□□□ 1.27
CLN6-210ENST00000635747 BICC1Q9H694 974 aaKnown RBP22.98■■□□□ 1.27
CLN6-210ENST00000635747 SCN9AQ15858 1988 aa22.98■■□□□ 1.27
CLN6-210ENST00000635747 TAF5LO75529 589 aa22.97■■□□□ 1.27
CLN6-210ENST00000635747 VEGFBP49765 207 aa22.97■■□□□ 1.27
CLN6-210ENST00000635747 DACT2Q5SW24 774 aa22.97■■□□□ 1.27
CLN6-210ENST00000635747 TTLL5Q6EMB2 1281 aa22.97■■□□□ 1.27
CLN6-210ENST00000635747 OGFOD1Q8N543 542 aa22.97■■□□□ 1.27
CLN6-210ENST00000635747 HELBQ8NG08 1087 aaPredicted RBP22.97■■□□□ 1.27
CLN6-210ENST00000635747 ZNF594Q96JF6 807 aaPredicted RBP22.97■■□□□ 1.27
CLN6-210ENST00000635747 USP44Q9H0E7 712 aa22.97■■□□□ 1.27
CLN6-210ENST00000635747 NOB1Q9ULX3 412 aaKnown RBP22.97■■□□□ 1.27
CLN6-210ENST00000635747 CELF2O95319 508 aaKnown RBP22.96■■□□□ 1.27
CLN6-210ENST00000635747 EGFRP00533 1210 aa22.96■■□□□ 1.27
CLN6-210ENST00000635747 RARSP54136 660 aaKnown RBP22.96■■□□□ 1.27
CLN6-210ENST00000635747 FMR1Q06787 632 aaKnown RBP eCLIP22.96■■□□□ 1.27
CLN6-210ENST00000635747 KRT26Q7Z3Y9 468 aa22.96■■□□□ 1.27
CLN6-210ENST00000635747 FBXW7Q969H0 707 aa22.96■■□□□ 1.27
CLN6-210ENST00000635747 ZNF804AQ7Z570 1209 aa22.95■■□□□ 1.26
CLN6-210ENST00000635747 USP48Q86UV5 1035 aa22.95■■□□□ 1.26
CLN6-210ENST00000635747 CD209Q9NNX6 404 aa22.95■■□□□ 1.26
CLN6-210ENST00000635747 MYOZ2Q9NPC6 264 aa22.95■■□□□ 1.26
CLN6-210ENST00000635747 HDAC5Q9UQL6 1122 aa22.95■■□□□ 1.26
CLN6-210ENST00000635747 TLL2Q9Y6L7 1015 aa22.95■■□□□ 1.26
CLN6-210ENST00000635747 KIF16BQ96L93 1317 aa22.94■■□□□ 1.26
CLN6-210ENST00000635747 PLIN1O60240 522 aa22.94■■□□□ 1.26
CLN6-210ENST00000635747 KLRK1P26718 216 aa22.94■■□□□ 1.26
CLN6-210ENST00000635747 ECE1P42892 770 aa22.94■■□□□ 1.26
CLN6-210ENST00000635747 UBE4AQ14139 1066 aa22.94■■□□□ 1.26
CLN6-210ENST00000635747 ARHGAP45Q92619 1136 aa22.94■■□□□ 1.26
CLN6-210ENST00000635747 MROH5Q6ZUA9 1318 aa22.93■■□□□ 1.26
CLN6-210ENST00000635747 HSPA1AP0DMV8 641 aaKnown RBP22.93■■□□□ 1.26
CLN6-210ENST00000635747 HSPA1BP0DMV9 641 aaKnown RBP22.93■■□□□ 1.26
CLN6-210ENST00000635747 SULF1Q8IWU6 871 aa22.93■■□□□ 1.26
CLN6-210ENST00000635747 HHIPL1Q96JK4 782 aa22.93■■□□□ 1.26
CLN6-210ENST00000635747 PSME4Q14997 1843 aa22.92■■□□□ 1.26
CLN6-210ENST00000635747 WDR33Q9C0J8 1336 aaKnown RBP22.92■■□□□ 1.26
CLN6-210ENST00000635747 IRS2Q9Y4H2 1338 aa22.92■■□□□ 1.26
CLN6-210ENST00000635747 GTF2IP78347 998 aa22.92■■□□□ 1.26
CLN6-210ENST00000635747 SCARF1Q14162 830 aa22.92■■□□□ 1.26
CLN6-210ENST00000635747 ANKRD44Q8N8A2 993 aa22.92■■□□□ 1.26
CLN6-210ENST00000635747 ZNF408Q9H9D4 720 aa22.92■■□□□ 1.26
CLN6-210ENST00000635747 HDAC9Q9UKV0 1011 aa22.92■■□□□ 1.26
CLN6-210ENST00000635747 RIPOR2Q9Y4F9 1068 aa22.92■■□□□ 1.26
CLN6-210ENST00000635747 TRPM7Q96QT4 1865 aa22.92■■□□□ 1.26
CLN6-210ENST00000635747 SNAP23O00161 211 aa22.91■■□□□ 1.26
CLN6-210ENST00000635747 IPO8O15397 1037 aaKnown RBP22.91■■□□□ 1.26
CLN6-210ENST00000635747 IL1R1P14778 569 aa22.91■■□□□ 1.26
CLN6-210ENST00000635747 HNRNPUQ00839 825 aaKnown RBP eCLIP22.91■■□□□ 1.26
CLN6-210ENST00000635747 SAPCD2Q86UD0 394 aa22.91■■□□□ 1.26
CLN6-210ENST00000635747 GGA3Q9NZ52 723 aa22.91■■□□□ 1.26
CLN6-210ENST00000635747 PITPNM2Q9BZ72 1349 aa22.9■■□□□ 1.26
CLN6-210ENST00000635747 UBTFL1P0CB47 393 aaPredicted RBP22.9■■□□□ 1.26
CLN6-210ENST00000635747 PAXIP1Q6ZW49 1069 aaPredicted RBP22.9■■□□□ 1.26
CLN6-210ENST00000635747 PUS3Q9BZE2 481 aaKnown RBP22.9■■□□□ 1.26
CLN6-210ENST00000635747 CAPNS2Q96L46 248 aa22.89■■□□□ 1.25
CLN6-210ENST00000635747 FKBP1AP62942 108 aaKnown RBP22.88■■□□□ 1.25
CLN6-210ENST00000635747 MAP2K1Q02750 393 aaPredicted RBP22.88■■□□□ 1.25
CLN6-210ENST00000635747 ANGEL2Q5VTE6 544 aaKnown RBP22.88■■□□□ 1.25
CLN6-210ENST00000635747 AIDAQ96BJ3 306 aa22.88■■□□□ 1.25
CLN6-210ENST00000635747 MXD3Q9BW11 206 aa22.88■■□□□ 1.25
CLN6-210ENST00000635747 METTL24Q5JXM2 366 aa22.87■■□□□ 1.25
CLN6-210ENST00000635747 C2orf69Q8N8R5 385 aa22.87■■□□□ 1.25
CLN6-210ENST00000635747 ADM5C9JUS6 153 aa22.86■■□□□ 1.25
CLN6-210ENST00000635747 SASH1O94885 1247 aa22.86■■□□□ 1.25
CLN6-210ENST00000635747 HIBADHP31937 336 aaKnown RBP22.86■■□□□ 1.25
CLN6-210ENST00000635747 LRRC24Q50LG9 513 aa22.86■■□□□ 1.25
CLN6-210ENST00000635747 KIAA0825Q8IV33 1275 aa22.86■■□□□ 1.25
CLN6-210ENST00000635747 MAP2K2P36507 400 aa22.85■■□□□ 1.25
CLN6-210ENST00000635747 INTS3Q68E01 1043 aaKnown RBP22.85■■□□□ 1.25
CLN6-210ENST00000635747 CYP4F22Q6NT55 531 aa22.85■■□□□ 1.25
CLN6-210ENST00000635747 GBA2Q9HCG7 927 aaPredicted RBP22.85■■□□□ 1.25
CLN6-210ENST00000635747 WBP1LQ9NX94 342 aa22.85■■□□□ 1.25
CLN6-210ENST00000635747 ASTN2O75129 1339 aaPredicted RBP22.84■■□□□ 1.25
CLN6-210ENST00000635747 WNT10BO00744 389 aa22.84■■□□□ 1.25
CLN6-210ENST00000635747 PDE8BO95263 885 aa22.84■■□□□ 1.25
CLN6-210ENST00000635747 HUNKP57058 714 aa22.84■■□□□ 1.25
CLN6-210ENST00000635747 NBPF9Q3BBW0 867 aa22.84■■□□□ 1.25
CLN6-210ENST00000635747 CAVIN4Q5BKX8 364 aa22.84■■□□□ 1.25
CLN6-210ENST00000635747 VPS37DQ86XT2 251 aa22.84■■□□□ 1.25
CLN6-210ENST00000635747 FAM84BQ96KN1 310 aaPredicted RBP22.84■■□□□ 1.25
CLN6-210ENST00000635747 FBXO3Q9UK99 471 aa22.84■■□□□ 1.25
CLN6-210ENST00000635747 GNAI3P08754 354 aa22.83■■□□□ 1.25
CLN6-210ENST00000635747 TDRD7Q8NHU6 1098 aaKnown RBP22.83■■□□□ 1.25
CLN6-210ENST00000635747 FAM205AQ6ZU69 1335 aa22.82■■□□□ 1.24
CLN6-210ENST00000635747 EYA2O00167 538 aa22.82■■□□□ 1.24
CLN6-210ENST00000635747 PTPN12Q05209 780 aaKnown RBP22.82■■□□□ 1.24
CLN6-210ENST00000635747 GRM1Q13255 1194 aa22.82■■□□□ 1.24
CLN6-210ENST00000635747 DLK2Q6UY11 383 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms