RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 FOXN1O15353 648 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 NEFLP07196 543 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 MYL6BP14649 208 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 TFIP11Q9UBB9 837 aaKnown RBP6.29□□□□□ -1.4
LINC00550-201ENST00000629293 ZMIZ1Q9ULJ6 1067 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 ZBED9Q6R2W3 1325 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 TRIM6-TRIM34B2RNG4 842 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 SP7Q8TDD2 431 aaPredicted RBP6.29□□□□□ -1.4
LINC00550-201ENST00000629293 JDP2Q8WYK2 163 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 ARFGEF1Q9Y6D6 1849 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 SBF1O95248 1867 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 BRCA1P38398 1863 aaKnown RBP6.29□□□□□ -1.4
LINC00550-201ENST00000629293 HAX1O00165 279 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 PER1O15534 1290 aaPredicted RBP6.29□□□□□ -1.4
LINC00550-201ENST00000629293 NEFMP07197 916 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 SNRPA1P09661 255 aaKnown RBP6.29□□□□□ -1.4
LINC00550-201ENST00000629293 PDE4CQ08493 712 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 TAF1DQ9H5J8 278 aaPredicted RBP6.29□□□□□ -1.4
LINC00550-201ENST00000629293 TJP1Q07157 1748 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 ZNF541Q9H0D2 1346 aa6.29□□□□□ -1.4
LINC00550-201ENST00000629293 PATL2C9JE40 543 aaKnown RBP6.28□□□□□ -1.4
LINC00550-201ENST00000629293 EPHX2P34913 555 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 VEGFBP49765 207 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 LBX1P52954 281 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 FMR1Q06787 632 aaKnown RBP eCLIP6.28□□□□□ -1.4
LINC00550-201ENST00000629293 HLFQ16534 295 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 SOGA3Q5TF21 947 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 HACL1Q9UJ83 578 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 LHX6Q9UPM6 363 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 CCDC88AQ3V6T2 1871 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 PPP1R3GB7ZBB8 358 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 NPR1P16066 1061 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 STYK1Q6J9G0 422 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 SLC51AQ86UW1 340 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 THUMPD2Q9BTF0 503 aaKnown RBP6.28□□□□□ -1.4
LINC00550-201ENST00000629293 MRS2Q9HD23 443 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 AFDNP55196 1824 aaKnown RBP6.28□□□□□ -1.4
LINC00550-201ENST00000629293 TBC1D9Q6ZT07 1266 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 LDHDQ86WU2 507 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 CNTROBQ8N137 903 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 LARGE2Q8N3Y3 721 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 PDZRN3Q9UPQ7 1066 aa6.28□□□□□ -1.4
LINC00550-201ENST00000629293 SCN11AQ9UI33 1791 aa6.27□□□□□ -1.41
LINC00550-201ENST00000629293 NBPF26B4DH59 902 aa6.27□□□□□ -1.41
LINC00550-201ENST00000629293 NBPF10Q6P3W6 841 aaKnown RBP6.27□□□□□ -1.41
LINC00550-201ENST00000629293 SYNE4Q8N205 404 aa6.27□□□□□ -1.41
LINC00550-201ENST00000629293 NBPF15Q8N660 670 aa6.27□□□□□ -1.41
LINC00550-201ENST00000629293 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.41
LINC00550-201ENST00000629293 ZNF408Q9H9D4 720 aa6.27□□□□□ -1.41
LINC00550-201ENST00000629293 EIF2S2P20042 333 aaKnown RBP6.27□□□□□ -1.41
LINC00550-201ENST00000629293 LMOD1P29536 600 aaPredicted RBP6.27□□□□□ -1.41
LINC00550-201ENST00000629293 FKBP4Q02790 459 aaKnown RBP eCLIP6.27□□□□□ -1.41
LINC00550-201ENST00000629293 IARSP41252 1262 aaKnown RBP6.27□□□□□ -1.41
LINC00550-201ENST00000629293 EIF6P56537 245 aaKnown RBP6.27□□□□□ -1.41
LINC00550-201ENST00000629293 WWC1Q8IX03 1113 aa6.27□□□□□ -1.41
LINC00550-201ENST00000629293 TMX4Q9H1E5 349 aaPredicted RBP6.27□□□□□ -1.41
LINC00550-201ENST00000629293 SLX4Q8IY92 1834 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 ANXA1P04083 346 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 ELOAQ14241 798 aaKnown RBP6.26□□□□□ -1.41
LINC00550-201ENST00000629293 DEFB115Q30KQ5 88 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 ERICH6BQ5W0A0 696 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 DNAJC14Q6Y2X3 702 aaPredicted RBP6.26□□□□□ -1.41
LINC00550-201ENST00000629293 TTLL7Q6ZT98 887 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 RTKN2Q8IZC4 609 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 MRC1P22897 1456 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 SMAPO00193 183 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 ALDH1B1P30837 517 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 EPS15P42566 896 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 CTCFP49711 727 aaPredicted RBP6.26□□□□□ -1.41
LINC00550-201ENST00000629293 CLEC4GQ6UXB4 293 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 KIF6Q6ZMV9 814 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 VRTNQ9H8Y1 702 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 PNMA3Q9UL41 463 aa6.26□□□□□ -1.41
LINC00550-201ENST00000629293 CCDC85CA6NKD9 419 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 TRAF5O00463 557 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 FDX1P10109 184 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 AIMP1Q12904 312 aaKnown RBP6.25□□□□□ -1.41
LINC00550-201ENST00000629293 TAF7Q15545 349 aaPredicted RBP6.25□□□□□ -1.41
LINC00550-201ENST00000629293 PROX2Q3B8N5 592 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 TNRC6CQ9HCJ0 1690 aaKnown RBP6.25□□□□□ -1.41
LINC00550-201ENST00000629293 CNTNAP1P78357 1384 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 LTBP3Q9NS15 1303 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 PPIP5K2O43314 1243 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 MTMR2Q13614 643 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 CYP4F22Q6NT55 531 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 PNMA8AQ86V59 439 aaPredicted RBP6.25□□□□□ -1.41
LINC00550-201ENST00000629293 C7orf43Q8WVR3 580 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 ZNF831Q5JPB2 1677 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 ITGBL1O95965 494 aaPredicted RBP6.25□□□□□ -1.41
LINC00550-201ENST00000629293 PPP2R1AP30153 589 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 USP46P62068 366 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 FAM9BQ8IZU0 186 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 PRM3Q9NNZ6 103 aa6.25□□□□□ -1.41
LINC00550-201ENST00000629293 AOC3Q16853 763 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 ZSWIM6Q9HCJ5 1215 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 CEMIPQ8WUJ3 1361 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 ABCC12Q96J65 1359 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 CACNA1SQ13698 1873 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 ADAMTS7Q9UKP4 1686 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 NIM1KQ8IY84 436 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms