RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 TRPM7Q96QT4 1865 aa13.25□□□□□ -0.29
TMCO1-209ENST00000628579 ZNF609O15014 1411 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 ASTN2O75129 1339 aaPredicted RBP13.24□□□□□ -0.29
TMCO1-209ENST00000628579 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 KCNJ4P48050 445 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 KIF4BQ2VIQ3 1234 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 TAF7LQ5H9L4 462 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 ANKRD44Q8N8A2 993 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 AGBL3Q8NEM8 1001 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 GMLQ99445 158 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 COA1Q9GZY4 146 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 USP44Q9H0E7 712 aa13.24□□□□□ -0.29
TMCO1-209ENST00000628579 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
TMCO1-209ENST00000628579 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
TMCO1-209ENST00000628579 VEGFBP49765 207 aa13.23□□□□□ -0.29
TMCO1-209ENST00000628579 ZNF280AP59817 542 aaPredicted RBP13.23□□□□□ -0.29
TMCO1-209ENST00000628579 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
TMCO1-209ENST00000628579 LDHAL6AQ6ZMR3 332 aa13.23□□□□□ -0.29
TMCO1-209ENST00000628579 FBXW7Q969H0 707 aa13.23□□□□□ -0.29
TMCO1-209ENST00000628579 PUS3Q9BZE2 481 aaKnown RBP13.23□□□□□ -0.29
TMCO1-209ENST00000628579 POLR2AP24928 1970 aaKnown RBP13.22□□□□□ -0.29
TMCO1-209ENST00000628579 RASSF10A6NK89 507 aa13.22□□□□□ -0.29
TMCO1-209ENST00000628579 PLIN1O60240 522 aa13.22□□□□□ -0.29
TMCO1-209ENST00000628579 CELF2O95319 508 aaKnown RBP13.22□□□□□ -0.29
TMCO1-209ENST00000628579 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
TMCO1-209ENST00000628579 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
TMCO1-209ENST00000628579 RARSP54136 660 aaKnown RBP13.22□□□□□ -0.29
TMCO1-209ENST00000628579 RABL6Q3YEC7 729 aaPredicted RBP13.22□□□□□ -0.29
TMCO1-209ENST00000628579 CDC37L1Q7L3B6 337 aa13.22□□□□□ -0.29
TMCO1-209ENST00000628579 USP48Q86UV5 1035 aa13.22□□□□□ -0.29
TMCO1-209ENST00000628579 ZNF408Q9H9D4 720 aa13.22□□□□□ -0.29
TMCO1-209ENST00000628579 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
TMCO1-209ENST00000628579 ADM5C9JUS6 153 aa13.21□□□□□ -0.29
TMCO1-209ENST00000628579 USP17L8P0C7I0 530 aa13.21□□□□□ -0.29
TMCO1-209ENST00000628579 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.29
TMCO1-209ENST00000628579 DEFB115Q30KQ5 88 aa13.21□□□□□ -0.29
TMCO1-209ENST00000628579 STRIP1Q5VSL9 837 aa13.21□□□□□ -0.29
TMCO1-209ENST00000628579 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
TMCO1-209ENST00000628579 KLHDC4Q8TBB5 520 aa13.21□□□□□ -0.29
TMCO1-209ENST00000628579 GGA3Q9NZ52 723 aa13.21□□□□□ -0.29
TMCO1-209ENST00000628579 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
TMCO1-209ENST00000628579 GTF2IP78347 998 aa13.2□□□□□ -0.3
TMCO1-209ENST00000628579 TTLL5Q6EMB2 1281 aa13.2□□□□□ -0.3
TMCO1-209ENST00000628579 C15orf52Q6ZUT6 534 aaKnown RBP13.2□□□□□ -0.3
TMCO1-209ENST00000628579 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
TMCO1-209ENST00000628579 MYOZ2Q9NPC6 264 aa13.2□□□□□ -0.3
TMCO1-209ENST00000628579 TLL2Q9Y6L7 1015 aa13.2□□□□□ -0.3
TMCO1-209ENST00000628579 GRM1Q13255 1194 aa13.19□□□□□ -0.3
TMCO1-209ENST00000628579 SCARF1Q14162 830 aa13.19□□□□□ -0.3
TMCO1-209ENST00000628579 LRRC24Q50LG9 513 aa13.19□□□□□ -0.3
TMCO1-209ENST00000628579 ANGEL2Q5VTE6 544 aaKnown RBP13.19□□□□□ -0.3
TMCO1-209ENST00000628579 SAPCD2Q86UD0 394 aa13.19□□□□□ -0.3
TMCO1-209ENST00000628579 DCPSQ96C86 337 aaKnown RBP13.19□□□□□ -0.3
TMCO1-209ENST00000628579 SCAF8Q9UPN6 1271 aaKnown RBP13.19□□□□□ -0.3
TMCO1-209ENST00000628579 RIPOR2Q9Y4F9 1068 aa13.19□□□□□ -0.3
TMCO1-209ENST00000628579 WDR33Q9C0J8 1336 aaKnown RBP13.18□□□□□ -0.3
TMCO1-209ENST00000628579 NBPF9Q3BBW0 867 aa13.18□□□□□ -0.3
TMCO1-209ENST00000628579 CYP4F22Q6NT55 531 aa13.18□□□□□ -0.3
TMCO1-209ENST00000628579 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
TMCO1-209ENST00000628579 ZNF804AQ7Z570 1209 aa13.18□□□□□ -0.3
TMCO1-209ENST00000628579 KIAA0825Q8IV33 1275 aa13.18□□□□□ -0.3
TMCO1-209ENST00000628579 CERS5Q8N5B7 392 aa13.18□□□□□ -0.3
TMCO1-209ENST00000628579 CAPNS2Q96L46 248 aa13.18□□□□□ -0.3
TMCO1-209ENST00000628579 API5Q9BZZ5 524 aaKnown RBP13.18□□□□□ -0.3
TMCO1-209ENST00000628579 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
TMCO1-209ENST00000628579 MYO3BQ8WXR4 1341 aa13.17□□□□□ -0.3
TMCO1-209ENST00000628579 BCAR3O75815 825 aa13.17□□□□□ -0.3
TMCO1-209ENST00000628579 IL1R1P14778 569 aa13.17□□□□□ -0.3
TMCO1-209ENST00000628579 GYG1P46976 350 aa13.17□□□□□ -0.3
TMCO1-209ENST00000628579 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
TMCO1-209ENST00000628579 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
TMCO1-209ENST00000628579 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
TMCO1-209ENST00000628579 MROH5Q6ZUA9 1318 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 WNT10BO00744 389 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 SASH1O94885 1247 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 UBTFL1P0CB47 393 aaPredicted RBP13.16□□□□□ -0.3
TMCO1-209ENST00000628579 RFX5P48382 616 aaPredicted RBP13.16□□□□□ -0.3
TMCO1-209ENST00000628579 UBE4AQ14139 1066 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 OGFOD1Q8N543 542 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 VGLL2Q8N8G2 317 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 MEIS3Q99687 375 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 THSD7BQ9C0I4 1608 aa13.16□□□□□ -0.3
TMCO1-209ENST00000628579 FOXN1O15353 648 aa13.15□□□□□ -0.3
TMCO1-209ENST00000628579 TRIM27P14373 513 aa13.15□□□□□ -0.3
TMCO1-209ENST00000628579 ARHGAP45Q92619 1136 aa13.15□□□□□ -0.3
TMCO1-209ENST00000628579 CDCA5Q96FF9 252 aa13.15□□□□□ -0.3
TMCO1-209ENST00000628579 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
TMCO1-209ENST00000628579 WBP1LQ9NX94 342 aa13.15□□□□□ -0.3
TMCO1-209ENST00000628579 LRRFIP2Q9Y608 721 aaKnown RBP13.15□□□□□ -0.3
TMCO1-209ENST00000628579 F8W031 263 aaPredicted RBP13.14□□□□□ -0.31
TMCO1-209ENST00000628579 AOC2O75106 756 aa13.14□□□□□ -0.31
TMCO1-209ENST00000628579 PDE8BO95263 885 aa13.14□□□□□ -0.31
TMCO1-209ENST00000628579 ECE1P42892 770 aa13.14□□□□□ -0.31
TMCO1-209ENST00000628579 HUNKP57058 714 aa13.14□□□□□ -0.31
TMCO1-209ENST00000628579 PTPN12Q05209 780 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms