RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 MVPQ14764 893 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 PUM3Q15397 648 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 DOK7Q18PE1 504 aa17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 LDHDQ86WU2 507 aa17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 AGBL3Q8NEM8 1001 aa17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 GPRC5DQ9NZD1 345 aa17.41■□□□□ 0.38
SNRPA1-216ENST00000626000 USP17L3A6NCW0 530 aa17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 USP17L4A6NCW7 530 aa17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 H7C1D1 291 aa17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 IFIT1P09914 478 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 CAVIN4Q5BKX8 364 aa17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 STRIP1Q5VSL9 837 aa17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 USP50Q70EL3 339 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 USP17L1Q7RTZ2 530 aa17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 ADARB2Q9NS39 739 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
SNRPA1-216ENST00000626000 POTECB2RU33 542 aa17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 PLIN1O60240 522 aa17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 TAF5LO75529 589 aa17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 VIL1P09327 827 aaKnown RBP17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 RLBP1P12271 317 aa17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 GMPSP49915 693 aaPredicted RBP17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 SCNN1DP51172 638 aa17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 HELBQ8NG08 1087 aaPredicted RBP17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 GPR101Q96P66 508 aaPredicted RBP17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
SNRPA1-216ENST00000626000 PSMD14O00487 310 aa17.38■□□□□ 0.37
SNRPA1-216ENST00000626000 LRRC24Q50LG9 513 aa17.38■□□□□ 0.37
SNRPA1-216ENST00000626000 RSBN1LQ6PCB5 846 aaPredicted RBP17.38■□□□□ 0.37
SNRPA1-216ENST00000626000 VPS37DQ86XT2 251 aa17.38■□□□□ 0.37
SNRPA1-216ENST00000626000 VGLL2Q8N8G2 317 aa17.38■□□□□ 0.37
SNRPA1-216ENST00000626000 PANK1Q8TE04 598 aa17.38■□□□□ 0.37
SNRPA1-216ENST00000626000 PUS3Q9BZE2 481 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-216ENST00000626000 SLC5A1P13866 664 aa17.37■□□□□ 0.37
SNRPA1-216ENST00000626000 IL1R1P14778 569 aa17.37■□□□□ 0.37
SNRPA1-216ENST00000626000 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
SNRPA1-216ENST00000626000 LPIN2Q92539 896 aa17.37■□□□□ 0.37
SNRPA1-216ENST00000626000 CD209Q9NNX6 404 aa17.37■□□□□ 0.37
SNRPA1-216ENST00000626000 AKAP2Q9Y2D5 859 aa17.37■□□□□ 0.37
SNRPA1-216ENST00000626000 SCN9AQ15858 1988 aa17.37■□□□□ 0.37
SNRPA1-216ENST00000626000 HIBADHP31937 336 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-216ENST00000626000 FKBP1AP62942 108 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-216ENST00000626000 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
SNRPA1-216ENST00000626000 OGFOD1Q8N543 542 aa17.36■□□□□ 0.37
SNRPA1-216ENST00000626000 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
SNRPA1-216ENST00000626000 ZC3H15Q8WU90 426 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-216ENST00000626000 CNOT7Q9UIV1 285 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-216ENST00000626000 IRS2Q9Y4H2 1338 aa17.36■□□□□ 0.37
SNRPA1-216ENST00000626000 HMMRO75330 724 aa17.35■□□□□ 0.37
SNRPA1-216ENST00000626000 G3BP1Q13283 466 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNRPA1-216ENST00000626000 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
SNRPA1-216ENST00000626000 TTLL5Q6EMB2 1281 aa17.35■□□□□ 0.37
SNRPA1-216ENST00000626000 ATG9AQ7Z3C6 839 aa17.35■□□□□ 0.37
SNRPA1-216ENST00000626000 RPAP2Q8IXW5 612 aaPredicted RBP17.35■□□□□ 0.37
SNRPA1-216ENST00000626000 SSH3Q8TE77 659 aa17.35■□□□□ 0.37
SNRPA1-216ENST00000626000 SIL1Q9H173 461 aa17.35■□□□□ 0.37
SNRPA1-216ENST00000626000 SASH1O94885 1247 aa17.34■□□□□ 0.37
SNRPA1-216ENST00000626000 POLA2Q14181 598 aa17.34■□□□□ 0.37
SNRPA1-216ENST00000626000 HSP90AB4PQ58FF6 505 aa17.34■□□□□ 0.37
SNRPA1-216ENST00000626000 TXNRD3Q86VQ6 643 aa17.34■□□□□ 0.37
SNRPA1-216ENST00000626000 MICALL2Q8IY33 904 aa17.34■□□□□ 0.37
SNRPA1-216ENST00000626000 ADAMTSL1Q8N6G6 1762 aa17.34■□□□□ 0.37
SNRPA1-216ENST00000626000 GNL3LQ9NVN8 582 aaKnown RBP17.34■□□□□ 0.37
SNRPA1-216ENST00000626000 HDAC9Q9UKV0 1011 aa17.34■□□□□ 0.37
SNRPA1-216ENST00000626000 COG6Q9Y2V7 657 aa17.34■□□□□ 0.37
SNRPA1-216ENST00000626000 ZBTB22O15209 634 aa17.33■□□□□ 0.36
SNRPA1-216ENST00000626000 USP17L8P0C7I0 530 aa17.33■□□□□ 0.36
SNRPA1-216ENST00000626000 FGFR2P21802 821 aa17.33■□□□□ 0.36
SNRPA1-216ENST00000626000 KLRK1P26718 216 aa17.33■□□□□ 0.36
SNRPA1-216ENST00000626000 EPS15P42566 896 aa17.33■□□□□ 0.36
SNRPA1-216ENST00000626000 ATP2B3Q16720 1220 aa17.33■□□□□ 0.36
SNRPA1-216ENST00000626000 DACT2Q5SW24 774 aa17.33■□□□□ 0.36
SNRPA1-216ENST00000626000 TBC1D22AQ8WUA7 517 aa17.33■□□□□ 0.36
SNRPA1-216ENST00000626000 CLEC11AQ9Y240 323 aa17.33■□□□□ 0.36
SNRPA1-216ENST00000626000 FAM205AQ6ZU69 1335 aa17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 PNMA6EA0A0J9YXQ4 647 aa17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 WTIPA6NIX2 430 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 FRAT2O75474 233 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 HSPA6P17066 643 aa17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 ZNF280AP59817 542 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 FBXO33Q7Z6M2 555 aa17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 ERC1Q8IUD2 1116 aa17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 TDRD7Q8NHU6 1098 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 FAM84BQ96KN1 310 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-216ENST00000626000 SEMA3EO15041 775 aa17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 APLP1P51693 650 aa17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 RRP1P56182 461 aaKnown RBP17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 GTF2IP78347 998 aa17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 OS9Q13438 667 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 CEP85Q6P2H3 762 aa17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 GMLQ99445 158 aa17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 KCNQ5Q9NR82 932 aa17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
SNRPA1-216ENST00000626000 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
SNRPA1-216ENST00000626000 SNAP23O00161 211 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms